RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 FAM131CQ96AQ9 280 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 SGTBQ96EQ0 304 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 RNF145Q96MT1 663 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 GAL3ST2Q9H3Q3 398 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 RPP21Q9H633 154 aaKnown RBP2.05□□□□□ -2.08
VCL-203ENST00000461383 PALLDQ8WX93 1383 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 TNIKQ9UKE5 1360 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 ANKRD12Q6UB98 2062 aa2.05□□□□□ -2.08
VCL-203ENST00000461383 SMIM26A0A096LP01 95 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 IGHV1-69DA0A0B4J2H0 117 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 A0A0J9YYE9 177 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 A0A1B0GVX0 72 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 A0A1W2PRF3 423 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 A0A1W2PRM7 423 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 SLC22A20A6NK97 555 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 ZNF99A8MXY4 864 aaPredicted RBP2.04□□□□□ -2.08
VCL-203ENST00000461383 HACD1B0YJ81 288 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 H3BN98 237 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 NMT2O60551 498 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 SLC16A7O60669 478 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 RP2O75695 350 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 SLC22A5O76082 557 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 ETHE1O95571 254 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 TRBC1P01850 177 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 CATP04040 527 aaKnown RBP2.04□□□□□ -2.08
VCL-203ENST00000461383 S100A9P06702 114 aaKnown RBP2.04□□□□□ -2.08
VCL-203ENST00000461383 CRYGCP07315 174 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 HOXC4P09017 264 aaPredicted RBP2.04□□□□□ -2.08
VCL-203ENST00000461383 PGA4P0DJD7 388 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 PGA3P0DJD8 388 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 GFAPP14136 432 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 ZNF823P16415 610 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 PSMC3P17980 439 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 MAGP20916 626 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 CPN2P22792 545 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 PPOXP50336 477 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 CACNG7P62955 275 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 CYP24A1Q07973 514 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 SLAQ13239 276 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 C5orf64Q2M2E5 130 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 FHOD3Q2V2M9 1422 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 NKAIN1Q4KMZ8 207 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 FBXW9Q5XUX1 488 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 MROH5Q6ZUA9 1318 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 KIF27Q86VH2 1401 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 OR10G6Q8NH81 332 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 ASZ1Q8WWH4 475 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 RERGQ96A58 199 aaPredicted RBP2.04□□□□□ -2.08
VCL-203ENST00000461383 PTX4Q96A99 478 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 FLYWCH2Q96CP2 140 aaKnown RBP2.04□□□□□ -2.08
VCL-203ENST00000461383 STARD4Q96DR4 205 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 NEURL4Q96JN8 1562 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 ARMC7Q9H6L4 198 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 C12orf10Q9HB07 376 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 RAB26Q9ULW5 256 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 PSG11Q9UQ72 335 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 HES2Q9Y543 173 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 TMEM14AQ9Y6G1 99 aa2.04□□□□□ -2.08
VCL-203ENST00000461383 IGHV3OR16-9A0A0B4J2B5 98 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 A0A0J9YXV3 536 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 ANKRD63C9JTQ0 380 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 NDUFC2-KCTD14E9PQ53 114 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 ERI3O43414 337 aaKnown RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 CHST10O43529 356 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 SNAI2O43623 268 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 LCA5LO95447 670 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 SNAI1O95863 264 aaPredicted RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 KLK1P06870 262 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 CTSLP07711 333 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 GABRG2P18507 467 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 HTR1DP28221 377 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 BMI1P35226 326 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 GGT2P36268 569 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 ARL2P36404 184 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 CFHR2P36980 270 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 RPL23P62829 140 aaKnown RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 PAFAH1B2P68402 229 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 FAM83EQ2M2I3 478 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 TFDP3Q5H9I0 405 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 AVPI1Q5T686 147 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 C6orf183Q5T699 404 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR2T5Q6IEZ7 315 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 Q6P435 159 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 RTL4Q6ZR62 310 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 SLC35D2Q76EJ3 337 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR2W3Q7Z3T1 314 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 RAB43Q86YS6 212 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 WDFY1Q8IWB7 410 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 SLC30A8Q8IWU4 369 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 PDCL2Q8N4E4 241 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 ASCC1Q8N9N2 400 aaKnown RBP2.03□□□□□ -2.08
VCL-203ENST00000461383 WDR31Q8NA23 367 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 C11orf72Q8NBR9 251 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR10G2Q8NGC3 310 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR4A15Q8NGL6 344 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR5AR1Q8NGP9 310 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR13C9Q8NGT0 318 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR6K6Q8NGW6 343 aa2.03□□□□□ -2.08
VCL-203ENST00000461383 OR2T29Q8NH02 315 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms