RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 BBS1Q8NFJ9 593 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 OR51F2Q8NH61 342 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 OR2AE1Q8NHA4 323 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 SPATA3Q8NHX4 192 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 TMEM186Q96B77 213 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 RAB39BQ96DA2 213 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 DUS3LQ96G46 650 aaKnown RBP13.02□□□□□ -0.33
VARS-219ENST00000461328 ABHD6Q9BV23 337 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 SEMA6AQ9H2E6 1030 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 ZNF665Q9H7R5 613 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 TMEM100Q9NV29 134 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 HIF1ANQ9NWT6 349 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 IL19Q9UHD0 177 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 PPP1R3CQ9UQK1 317 aa13.02□□□□□ -0.33
VARS-219ENST00000461328 GGT3PA6NGU5 568 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 H2BFMP0C1H6 154 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 ANPEPP15144 967 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 OTX1P32242 354 aaPredicted RBP13.01□□□□□ -0.33
VARS-219ENST00000461328 THBS2P35442 1172 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 SRP9P49458 86 aaKnown RBP13.01□□□□□ -0.33
VARS-219ENST00000461328 APOFQ13790 326 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 KPNB1Q14974 876 aaKnown RBP13.01□□□□□ -0.33
VARS-219ENST00000461328 PTGES3Q15185 160 aaKnown RBP13.01□□□□□ -0.33
VARS-219ENST00000461328 GLYATL3Q5SZD4 288 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 LCN1P1Q5VSP4 162 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 TIGD4Q8IY51 512 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 THEM6Q8WUY1 208 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 PYDC1Q8WXC3 89 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 GABARAPL1Q9H0R8 117 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 TOR3AQ9H497 397 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 TMEM106BQ9NUM4 274 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 UBAP1Q9NZ09 502 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 DNAJC27Q9NZQ0 273 aa13.01□□□□□ -0.33
VARS-219ENST00000461328 MXRA5Q9NR99 2828 aa13□□□□□ -0.33
VARS-219ENST00000461328 TRAV20A0A0B4J274 112 aa13□□□□□ -0.33
VARS-219ENST00000461328 IGHV3-64DA0A0J9YX35 117 aa13□□□□□ -0.33
VARS-219ENST00000461328 H0YL77 283 aa13□□□□□ -0.33
VARS-219ENST00000461328 APOC1P02654 83 aa13□□□□□ -0.33
VARS-219ENST00000461328 LYNP07948 512 aa13□□□□□ -0.33
VARS-219ENST00000461328 ZNF92Q03936 586 aa13□□□□□ -0.33
VARS-219ENST00000461328 HNRNPA0Q13151 305 aaKnown RBP13□□□□□ -0.33
VARS-219ENST00000461328 TIGD6Q17RP2 521 aa13□□□□□ -0.33
VARS-219ENST00000461328 HIST2H2ABQ8IUE6 130 aaPredicted RBP13□□□□□ -0.33
VARS-219ENST00000461328 ZNF454Q8N9F8 522 aa13□□□□□ -0.33
VARS-219ENST00000461328 RNF133Q8WVZ7 376 aa13□□□□□ -0.33
VARS-219ENST00000461328 CENPNQ96H22 339 aaPredicted RBP13□□□□□ -0.33
VARS-219ENST00000461328 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
VARS-219ENST00000461328 SLC30A2Q9BRI3 323 aa13□□□□□ -0.33
VARS-219ENST00000461328 SP140LQ9H930 580 aa13□□□□□ -0.33
VARS-219ENST00000461328 MARCH7Q9H992 704 aa13□□□□□ -0.33
VARS-219ENST00000461328 BRD7Q9NPI1 651 aa13□□□□□ -0.33
VARS-219ENST00000461328 OAZ3Q9UMX2 235 aa13□□□□□ -0.33
VARS-219ENST00000461328 NOP16Q9Y3C1 178 aaKnown RBP13□□□□□ -0.33
VARS-219ENST00000461328 NPTNQ9Y639 398 aa13□□□□□ -0.33
VARS-219ENST00000461328 COL6A5A8TX70 2615 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 F5H5P2 479 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 M0R129 80 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 XRCC2O43543 280 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 PRKYO43930 277 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 HLA-DPB1P04440 258 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 MRPL3P09001 348 aaKnown RBP12.99□□□□□ -0.33
VARS-219ENST00000461328 SBK2P0C263 348 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 MMP16P51512 607 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 ACTR3P61158 418 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 OR8G1Q15617 311 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 GFOD2Q3B7J2 385 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 KDM4DQ6B0I6 523 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 FAM57BQ71RH2 274 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 PHC2Q8IXK0 858 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 OTOSQ8NHW6 89 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 AMELYQ99218 206 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 CIB1Q99828 191 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 ADAT1Q9BUB4 502 aaKnown RBP12.99□□□□□ -0.33
VARS-219ENST00000461328 RIBC2Q9H4K1 309 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 OPA3Q9H6K4 179 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 DCAF16Q9NXF7 216 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 H2AFY2Q9P0M6 372 aaPredicted RBP12.99□□□□□ -0.33
VARS-219ENST00000461328 LAMP5Q9UJQ1 280 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 PCDHB10Q9UN67 800 aa12.99□□□□□ -0.33
VARS-219ENST00000461328 C5orf63A6NC05 138 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 MLNRO43193 412 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 IGHV2-5P01817 119 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 SLC2A5P22732 501 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 OPRL1P41146 370 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 ZNF121P58317 390 aaPredicted RBP12.98□□□□□ -0.33
VARS-219ENST00000461328 SLX4IPQ5VYV7 408 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 ZFP1Q6P2D0 407 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 FAHD2BQ6P2I3 314 aaPredicted RBP12.98□□□□□ -0.33
VARS-219ENST00000461328 SLC16A9Q7RTY1 509 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 MOGAT3Q86VF5 341 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 TCEANCQ8N8B7 351 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 OR56B2PQ8NGI1 322 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 FAHD2AQ96GK7 314 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 PGAM5Q96HS1 289 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 SLC22A4Q9H015 551 aa12.98□□□□□ -0.33
VARS-219ENST00000461328 OR10A2Q9H208 303 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms