RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 IGFL2Q6UWQ7 119 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 ZNF786Q8N393 782 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 Q8N976 141 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 C8orf31Q8N9H6 132 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 GPX8Q8TED1 209 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 ZFP90Q8TF47 636 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 ABHD3Q8WU67 409 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 EEF1AKMT3Q96AZ1 226 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 ISG20Q96AZ6 181 aaKnown RBP2.44□□□□□ -2.02
CLK1-206ENST00000461326 C9orf72Q96LT7 481 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 ANKRD60Q9BZ19 345 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 UCK2Q9BZX2 261 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 CRLF2Q9HC73 371 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 LYRM4Q9HD34 91 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 SLC40A1Q9NP59 571 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 CLN6Q9NWW5 311 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 TRMT112Q9UI30 125 aaKnown RBP2.44□□□□□ -2.02
CLK1-206ENST00000461326 TOGARAM1Q9Y4F4 1720 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 KIF24Q5T7B8 1368 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 ITGB4P16144 1822 aa2.44□□□□□ -2.02
CLK1-206ENST00000461326 MN1Q10571 1320 aaPredicted RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 TTC41PQ6P2S7 1318 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 PCDH11XQ9BZA7 1347 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 SRCAPQ6ZRS2 3230 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 IGLV1-50A0A075B6I6 118 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 IGLV3-16A0A075B6K0 115 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 AIREO43918 545 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 GABARAPO95166 117 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 POLR2MP0CAP2 368 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 IGHV1-8P0DP01 117 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 CEACAM3P40198 252 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 CCT6AP40227 531 aaKnown RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 RPS5P46782 204 aaKnown RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 CLDN8P56748 225 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 RSPO1Q2MKA7 263 aaPredicted RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 ARL9Q6T311 187 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 NPSR1Q6W5P4 371 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 MBOAT2Q6ZWT7 520 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 CHST4Q8NCG5 386 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 ZNF596Q8TC21 504 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 APH1BQ8WW43 257 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 PEX13Q92968 403 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 MRGPRFQ96AM1 343 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 DCPSQ96C86 337 aaKnown RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 TM4SF18Q96CE8 201 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 CFAP53Q96M91 514 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 OR2A5Q96R48 311 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 CHAC1Q9BUX1 264 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 PDP1Q9P0J1 537 aaPredicted RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 PEF1Q9UBV8 284 aaKnown RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 CTSFQ9UBX1 484 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 ZNF282Q9UDV7 671 aaPredicted RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 TBX21Q9UL17 535 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 PSG8Q9UQ74 426 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 PLEKHG2Q9H7P9 1386 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 RGPD3A6NKT7 1758 aaPredicted RBP2.43□□□□□ -2.02
CLK1-206ENST00000461326 RGPD4Q7Z3J3 1758 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 SCN11AQ9UI33 1791 aa2.43□□□□□ -2.02
CLK1-206ENST00000461326 LY75O60449 1722 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 DLG5Q8TDM6 1919 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 C5P01031 1676 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 IGHV5-10-1A0A0J9YXX1 117 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 OR6C74A6NCV1 312 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 TMX2-CTNND1H3BSU7 103 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 K7EMT4 169 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 TRDMT1O14717 391 aaKnown RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 FCN3O75636 299 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 HPRT1P00492 218 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 HOXC4P09017 264 aaPredicted RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 UBTFL6P0CB48 400 aaPredicted RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 UBCP0CG48 685 aaKnown RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 ERGP11308 486 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 CTRB1P17538 263 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 GGT1P19440 569 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 RAB3AP20336 220 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 RAB4AP20338 218 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 U2AF2P26368 475 aaKnown RBP eCLIP2.42□□□□□ -2.024e-11■■□□□ 13
CLK1-206ENST00000461326 OR1E1P30953 314 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 CSNK1A1P48729 337 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 UCNP55089 124 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 UBE2NP61088 152 aaKnown RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 RAB11AP62491 216 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 PRR3P79522 188 aaKnown RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 DNAJC3Q13217 504 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 ILKQ13418 452 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 WDR43Q15061 677 aaKnown RBP eCLIP2.42□□□□□ -2.02
CLK1-206ENST00000461326 PON2Q15165 354 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 RAB11BQ15907 218 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 KLHL40Q2TBA0 621 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 PIP5KL1Q5T9C9 394 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 GPR107Q5VW38 600 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 OR52W1Q6IF63 320 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 Q6P435 159 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 ABHD12BQ7Z5M8 362 aaPredicted RBP2.42□□□□□ -2.02
CLK1-206ENST00000461326 KRTAP11-1Q8IUC1 163 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 SAXO1Q8IYX7 474 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 OR52E2Q8NGJ4 325 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 OR6Q1Q8NGQ2 317 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 ZNF681Q96N22 645 aa2.42□□□□□ -2.02
CLK1-206ENST00000461326 CAMK2N2Q96S95 79 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms