RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 PMCHP20382 165 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 CLDN20P56880 219 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 OR1D5P58170 312 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 NKAIN1Q4KMZ8 207 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 C17orf99Q6UX52 265 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 DEFB108BQ8NET1 73 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 HGDQ93099 445 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 GALMQ96C23 342 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 GRAMD2BQ96HH9 432 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 EDEM2Q9BV94 578 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 CDCA4Q9BXL8 241 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 TOLLIPQ9H0E2 274 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 OCIAD1Q9NX40 245 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 DSCR3O14972 297 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 SPCS3P61009 180 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PPIAP62937 165 aaKnown RBP8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PMP22Q01453 160 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 NKAIN4Q8IVV8 208 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PELI3Q8N2H9 469 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 ST8SIA2Q92186 375 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 GABARAPL3Q9BY60 117 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PBOV1Q9GZY1 135 aa8.17□□□□□ -1.1
BRCA1-205ENST00000461221 LSM2Q9Y333 95 aaKnown RBP8.17□□□□□ -1.1
BRCA1-205ENST00000461221 PHOX2AO14813 284 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 DUS4LO95620 317 aaKnown RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 IL5P05113 134 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 EPHA2P29317 976 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 HRH1P35367 487 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 FAM3AP98173 230 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 DUSP8Q13202 625 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF750Q32MQ0 723 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 GALNT16Q8N428 558 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 OR1J1Q8NGS3 322 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SMIM14Q96QK8 99 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 EMC6Q9BV81 110 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM147Q9BVK8 224 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 DEFB127Q9H1M4 99 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 CICQ96RK0 1608 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SDCBPO00560 298 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TAPBPO15533 448 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 CRYBA1P05813 215 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 NPPBP16860 134 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SULT1A2P50226 295 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 HIST1H3AP68431 136 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM183BQ1AE95 376 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TOMM20LQ6UXN7 152 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 OSR2Q8N2R0 312 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 BLNKQ8WV28 456 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 OR8B4Q96RC9 309 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 GMLQ99445 158 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SLC25A19Q9HC21 320 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 FZD6O60353 706 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 FUCA1P04066 466 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 HIST1H1CP16403 213 aaKnown RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ARRB2P32121 409 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 PIGAP37287 484 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ETFDHQ16134 617 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TUSC1Q2TAM9 212 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 LRRC10Q5BKY1 277 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 RNASEKQ6P5S7 137 aaKnown RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 OR4S1Q8NGB4 309 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 RTN4IP1Q8WWV3 396 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF768Q9H5H4 540 aaKnown RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 CCDC187A0A096LP49 1063 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 OR2T8A6NH00 312 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 BMPR1BO00238 502 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 PLPP1O14494 284 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 GJB3O75712 270 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 OR5AL1P0C617 328 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ANKRD34CP0C6C1 535 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 FUT6P51993 359 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ADPRHP54922 357 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 INSM1Q01101 510 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 FZD2Q14332 565 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ZBTB44Q8NCP5 570 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 NEIL1Q96FI4 390 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ACY3Q96HD9 319 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 MRGPRX4Q96LA9 322 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SDF2Q99470 211 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 C1QTNF6Q9BXI9 259 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 GSX1Q9H4S2 264 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 DAPP1Q9UN19 280 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 UBE2L5PA0A1B0GUS4 154 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SERPINE3A8MV23 424 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 NRG2O14511 850 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 Q56UQ5 140 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 RGS7BPQ6MZT1 257 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TMPRSS11FQ6ZWK6 438 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 RBM45Q8IUH3 476 aaKnown RBP8.16□□□□□ -1.1
BRCA1-205ENST00000461221 CADM3Q8N126 398 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM229BQ8NBD8 167 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF740Q8NDX6 193 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 SMIM19Q96E16 107 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 FBXO4Q9UKT5 387 aa8.16□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM30CPA0ZSE6 113 aa8.15□□□□□ -1.1
BRCA1-205ENST00000461221 PRSS37A4D1T9 235 aa8.15□□□□□ -1.1
BRCA1-205ENST00000461221 FAM24AA6NFZ4 105 aa8.15□□□□□ -1.1
BRCA1-205ENST00000461221 IFITM5A6NNB3 132 aa8.15□□□□□ -1.1
BRCA1-205ENST00000461221 CTSLP07711 333 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms