RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 RAB39AQ14964 217 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 KRTAP27-1Q3LI81 207 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 VHLLQ6RSH7 139 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 TMPRSS11AQ6ZMR5 421 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 KLHL36Q8N4N3 616 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 NANOGP1Q8N7R0 232 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 OR52N1Q8NH53 320 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 ATF6BQ99941 703 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 CCDC90BQ9GZT6 254 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 BARX1Q9HBU1 254 aaPredicted RBP13.4□□□□□ -0.26
SDF4-204ENST00000459994 CLEC2DQ9UHP7 191 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 MRM2Q9UI43 246 aaKnown RBP13.4□□□□□ -0.26
SDF4-204ENST00000459994 IKZF2Q9UKS7 526 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 ERGIC3Q9Y282 383 aa13.4□□□□□ -0.26
SDF4-204ENST00000459994 DNHD1Q96M86 4753 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 APOC1P02654 83 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 TACSTD2P09758 323 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 STOMP27105 288 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 OTX1P32242 354 aaPredicted RBP13.39□□□□□ -0.27
SDF4-204ENST00000459994 HTR5AP47898 357 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 CDH15P55291 814 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 TAF13Q15543 124 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 TBCEQ15813 527 aaPredicted RBP13.39□□□□□ -0.27
SDF4-204ENST00000459994 ADIPOQQ15848 244 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 MSMPQ1L6U9 139 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 RSPO1Q2MKA7 263 aaPredicted RBP13.39□□□□□ -0.27
SDF4-204ENST00000459994 LRRN1Q6UXK5 716 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.39□□□□□ -0.27
SDF4-204ENST00000459994 ZNF584Q8IVC4 421 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 SVOPQ8N4V2 548 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 ZNF485Q8NCK3 441 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 IL17RDQ8NFM7 739 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 TSPAN14Q8NG11 270 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 OR1J2Q8NGS2 313 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 HAVCR2Q8TDQ0 301 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 SPTSSAQ969W0 71 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 POM121L2Q96KW2 1035 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 DCLRE1CQ96SD1 692 aaKnown RBP13.39□□□□□ -0.27
SDF4-204ENST00000459994 KCNJ15Q99712 375 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 MDFIQ99750 246 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 ELOVL3Q9HB03 270 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 CA10Q9NS85 328 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 SNX5Q9Y5X3 404 aa13.39□□□□□ -0.27
SDF4-204ENST00000459994 LOC100509620A0A075B734 347 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 A0A087WXM4 84 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 IGHV2OR16-5A0A0B4J2B6 119 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 MAGEA13PA6NCF6 341 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 TRIM64CA6NLI5 447 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 MYL12BO14950 172 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 MAGEB4O15481 346 aaPredicted RBP13.38□□□□□ -0.27
SDF4-204ENST00000459994 CD5LO43866 347 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 MT-ND5P03915 603 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 APEX1P27695 318 aaKnown RBP13.38□□□□□ -0.27
SDF4-204ENST00000459994 APLNRP35414 380 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 GDI2P50395 445 aaKnown RBP13.38□□□□□ -0.27
SDF4-204ENST00000459994 RIDAP52758 137 aaKnown RBP13.38□□□□□ -0.27
SDF4-204ENST00000459994 OR12D2P58182 307 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 MRPL28Q13084 256 aaKnown RBP13.38□□□□□ -0.27
SDF4-204ENST00000459994 TP53I3Q53FA7 332 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 SPATC1Q76KD6 591 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 FAM220AQ7Z4H9 259 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 SPARTQ8N0X7 666 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 YIPF7Q8N8F6 280 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 SLC30A7Q8NEW0 376 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 C10orf105Q8TEF2 133 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 MND1Q9BWT6 205 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 TTTY10Q9BZA0 68 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 LRP12Q9Y561 859 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 JMJD1CQ15652 2540 aa13.38□□□□□ -0.27
SDF4-204ENST00000459994 J3QLW9 94 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 PSMD9O00233 223 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 CRLF1O75462 422 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 CRYAAP02489 173 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 OR4A8P0C604 315 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 ZNF19P17023 458 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 THBS4P35443 961 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 EFNA4P52798 201 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 TPTEP56180 551 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 WNT4P56705 351 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 EMX1Q04741 257 aaPredicted RBP13.37□□□□□ -0.27
SDF4-204ENST00000459994 TBC1D28Q2M2D7 210 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 OR2G6Q5TZ20 316 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 LIPNQ5VXI9 398 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 CLEC2AQ6UVW9 174 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 DRAM2Q6UX65 266 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 ZCCHC24Q8N2G6 241 aaKnown RBP13.37□□□□□ -0.27
SDF4-204ENST00000459994 SPRYD4Q8WW59 207 aaPredicted RBP13.37□□□□□ -0.27
SDF4-204ENST00000459994 C4orf36Q96KX1 117 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 ISG20L2Q9H9L3 353 aaKnown RBP13.37□□□□□ -0.27
SDF4-204ENST00000459994 YAE1D1Q9NRH1 226 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 BABAM2Q9NXR7 383 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 GNG8Q9UK08 70 aa13.37□□□□□ -0.27
SDF4-204ENST00000459994 LSM2Q9Y333 95 aaKnown RBP13.37□□□□□ -0.27
SDF4-204ENST00000459994 ACOD1A6NK06 481 aa13.36□□□□□ -0.27
SDF4-204ENST00000459994 M0R135 149 aa13.36□□□□□ -0.27
SDF4-204ENST00000459994 ICMTO60725 284 aa13.36□□□□□ -0.27
SDF4-204ENST00000459994 SRSF10O75494 262 aaKnown RBP13.36□□□□□ -0.27
SDF4-204ENST00000459994 ACSM4P0C7M7 580 aa13.36□□□□□ -0.27
SDF4-204ENST00000459994 HSD11B1P28845 292 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms