RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 A0A0G2JMP0 313 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 A0A0X1KG70 313 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 F5H5P2 479 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 H0YL77 283 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 TMEM178BH3BS89 294 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 PRKACGP22612 351 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 PRSS12P56730 875 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 GRB2P62993 217 aaKnown RBP13.58□□□□□ -0.24
COL7A1-203ENST00000459756 CDK5Q00535 292 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 EIF2B1Q14232 305 aaKnown RBP13.58□□□□□ -0.24
COL7A1-203ENST00000459756 RHOUQ7L0Q8 258 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 LRRC28Q86X40 367 aaPredicted RBP13.58□□□□□ -0.24
COL7A1-203ENST00000459756 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
COL7A1-203ENST00000459756 CELF2-AS1Q8N7Q2 184 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 OR4M2Q8NGB6 313 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 PYDC1Q8WXC3 89 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 REPIN1Q9BWE0 567 aaKnown RBP13.58□□□□□ -0.24
COL7A1-203ENST00000459756 SLC22A4Q9H015 551 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 TOR3AQ9H497 397 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 OPA3Q9H6K4 179 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 NTN4Q9HB63 628 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 PCDHB10Q9UN67 800 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
COL7A1-203ENST00000459756 CD300LBA8K4G0 201 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 PRR23D1E9PI22 279 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-203ENST00000459756 J3QLI3 93 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 PRODHO43272 600 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 HLA-DPB1P04440 258 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 PRR23D2P0DMB1 279 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-203ENST00000459756 GATA3P23771 443 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 MDH2P40926 338 aaKnown RBP13.57□□□□□ -0.24
COL7A1-203ENST00000459756 PRKXP51817 358 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 ZNF92Q03936 586 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 HNRNPA0Q13151 305 aaKnown RBP13.57□□□□□ -0.24
COL7A1-203ENST00000459756 SCGB2A2Q13296 93 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 ZMYND11Q15326 602 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 ZNF181Q2M3W8 571 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 GLYATL3Q5SZD4 288 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 PLBD1Q6P4A8 553 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 SPATC1Q76KD6 591 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 ZNF771Q7L3S4 317 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-203ENST00000459756 SHFQ7M4L6 423 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 DPY19L4Q7Z388 723 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 MUC20Q8N307 709 aaPredicted RBP13.57□□□□□ -0.24
COL7A1-203ENST00000459756 OR6N2Q8NGY6 317 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 PLEKHA8Q96JA3 519 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 OR51V1Q9H2C8 321 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 KIF17Q9P2E2 1029 aa13.57□□□□□ -0.24
COL7A1-203ENST00000459756 LRRC30A6NM36 301 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 FOXH1O75593 365 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 FSTL3O95633 263 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 APOC1P02654 83 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 HSD11B1P28845 292 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 CD200P41217 278 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 GATA4P43694 442 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 CX3CR1P49238 355 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 RAD23AP54725 363 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 ACTR3P61158 418 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 DCAF12L2Q5VW00 463 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 FAHD1Q6P587 224 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 MOGAT3Q86VF5 341 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 TIGD4Q8IY51 512 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 RFLNBQ8N5W9 214 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 ZNF454Q8N9F8 522 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 OR2AE1Q8NHA4 323 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 ZNF420Q8TAQ5 688 aaPredicted RBP13.56□□□□□ -0.24
COL7A1-203ENST00000459756 RNF133Q8WVZ7 376 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 LRTOMTQ8WZ04 291 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 ERGIC1Q969X5 290 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 ABHD6Q9BV23 337 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 SP140LQ9H930 580 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
COL7A1-203ENST00000459756 SLC25A19Q9HC21 320 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 PAPOLBQ9NRJ5 636 aaKnown RBP13.56□□□□□ -0.24
COL7A1-203ENST00000459756 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
COL7A1-203ENST00000459756 PPIAL4EA0A075B759 164 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 PPIAL4CA0A0B4J2A2 164 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 C5orf63A6NC05 138 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 GGT3PA6NGU5 568 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 PPIAL4DF5H284 164 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 XRCC2O43543 280 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 GMDSO60547 372 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 PPIAL4FP0DN26 164 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 SLC2A1P11166 492 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 CA6P23280 308 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 CPT2P23786 658 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 FASP25445 335 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 RBMXP38159 391 aaKnown RBP13.55□□□□□ -0.24
COL7A1-203ENST00000459756 LCN2P80188 198 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 OR8G1Q15617 311 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 KLHL12Q53G59 568 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 SLC35D3Q5M8T2 416 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 LIPNQ5VXI9 398 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 AMIGO2Q86SJ2 522 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 CPOQ8IVL8 374 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 C1orf87Q8N0U7 546 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 PARP8Q8N3A8 854 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 SPSB4Q96A44 273 aa13.55□□□□□ -0.24
COL7A1-203ENST00000459756 ZMYND19Q96E35 227 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-203ENST00000459756 SEMA6AQ9H2E6 1030 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms