RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 BTBD10Q9BSF8 475 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 COPS4Q9BT78 406 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 TMEM165Q9HC07 324 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 PNRC2Q9NPJ4 139 aaKnown RBP13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 UFSP2Q9NUQ7 469 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNF69Q9UC07 566 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 POLR3KQ9Y2Y1 108 aaPredicted RBP13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 NOP16Q9Y3C1 178 aaKnown RBP13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 N6AMT1Q9Y5N5 214 aa13.19□□□□□ -0.3
CHCHD3-204ENST00000457942 IGHV3OR16-10A0A075B7F0 116 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 WNT2P09544 360 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 PITPNBP48739 271 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 PPP1R8Q12972 351 aaKnown RBP13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 BAMBIQ13145 260 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 KRTAP27-1Q3LI81 207 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNF404Q494X3 552 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 LYPD4Q6UWN0 246 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 LNX2Q8N448 690 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 BOLLQ8N9W6 283 aaKnown RBP13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 AQP11Q8NBQ7 271 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 DVL3Q92997 716 aaPredicted RBP13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 CCDC124Q96CT7 223 aaKnown RBP13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 ADAT1Q9BUB4 502 aaKnown RBP13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 MMADHCQ9H3L0 296 aaPredicted RBP13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 ACTR3BQ9P1U1 418 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 CLN8Q9UBY8 286 aa13.18□□□□□ -0.3
CHCHD3-204ENST00000457942 IGHV2-70DA0A0C4DH43 119 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 BHLHE40O14503 412 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 FAM20BO75063 409 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 SOX14O95416 240 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 GASTP01350 101 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 CA6P23280 308 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 CPT2P23786 658 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 FMO3P31513 532 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNF181Q2M3W8 571 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 LRRN1Q6UXK5 716 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 RASSF6Q6ZTQ3 369 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 DOK3Q7L591 496 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 DCXRQ7Z4W1 244 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 BCL6BQ8N143 479 aaPredicted RBP13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 SLC37A3Q8NCC5 494 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 C19orf18Q8NEA5 215 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 OR8D4Q8NGM9 314 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 OR6K6Q8NGW6 343 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 OR2AE1Q8NHA4 323 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 TSSK6Q9BXA6 273 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 TRIM15Q9C019 465 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 SLC22A4Q9H015 551 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 REEP1Q9H902 201 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 UNKLQ9H9P5 680 aaKnown RBP13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 FN3KRPQ9HA64 309 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 CENPMQ9NSP4 180 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 SAMHD1Q9Y3Z3 626 aaKnown RBP13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 COMMD3-BMI1R4GMX3 469 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 U3KQV3 271 aa13.17□□□□□ -0.3
CHCHD3-204ENST00000457942 TRAV40A0A0B4J280 105 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 CD300LBA8K4G0 201 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 IFNGP01579 166 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 GYPBP06028 91 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 CD80P33681 288 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 PMELP40967 661 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 CD200P41217 278 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 GATA4P43694 442 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 ENTPD1P49961 510 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 PRKXP51817 358 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 FOXL1Q12952 345 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 MAB21L1Q13394 359 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 CRMP1Q14194 572 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 KLF17Q5JT82 389 aaPredicted RBP13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 DCDC5Q6ZRR9 648 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 SPATC1Q76KD6 591 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 DHFR2Q86XF0 187 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 CELF2-AS1Q8N7Q2 184 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 OR2T33Q8NG76 320 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 OR10S1Q8NGN2 331 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 RAB40AQ8WXH6 277 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 ERGIC1Q969X5 290 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 TECTBQ96PL2 329 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 ARMC1Q9NVT9 282 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 TAS2R1Q9NYW7 299 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 IL20Q9NYY1 176 aa13.16□□□□□ -0.3
CHCHD3-204ENST00000457942 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 A6NLC8 198 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 RIIAD1A6NNX1 92 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 TBX1O43435 398 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 IGHV4-38-2P0DP08 117 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 HKR1P10072 659 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 SLC2A1P11166 492 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNF3P17036 446 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 PRTN3P24158 256 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 MTNR1AP48039 350 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 HMGA2P52926 109 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 ZNF92Q03936 586 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 PAX8Q06710 450 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 OR8B8Q15620 311 aa13.15□□□□□ -0.3
CHCHD3-204ENST00000457942 MPPED2Q15777 294 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms