RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 EFNB2P52799 333 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 HIST1H3AP68431 136 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 HIST2H3PS2Q5TEC6 136 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 HIST2H3AQ71DI3 136 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 MRPL21Q7Z2W9 205 aaKnown RBP19.05■□□□□ 0.64
PTPRA-208ENST00000455631 LYG1Q8N1E2 194 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 FAM156AQ8NDB6 213 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 CFHR4Q92496 578 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 PARD6BQ9BYG5 372 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 SLC22A4Q9H015 551 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 NUAK2Q9H093 628 aa19.05■□□□□ 0.64
PTPRA-208ENST00000455631 NMNAT1Q9HAN9 279 aaPredicted RBP19.05■□□□□ 0.64
PTPRA-208ENST00000455631 IGHV3OR15-7A0A075B7D8 119 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 LCATP04180 440 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 ACSM4P0C7M7 580 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 DLX1P56177 255 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 KLRD1Q13241 179 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 KCNMB1Q16558 191 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 RSPO1Q2MKA7 263 aaPredicted RBP19.04■□□□□ 0.64
PTPRA-208ENST00000455631 ZBED5Q49AG3 693 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 CYBRD1Q53TN4 286 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 RABL3Q5HYI8 236 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 C11orf88Q6PI97 169 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 ZNF730Q6ZMV8 503 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 ZNF826PQ6ZT77 177 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 CMTM4Q8IZR5 234 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 OFCC1Q8IZS5 231 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 OR4C13Q8NGP0 309 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 FNDC11Q9BVV2 318 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 NOTCH3Q9UM47 2321 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 AURKCQ9UQB9 309 aa19.04■□□□□ 0.64
PTPRA-208ENST00000455631 A0A1B0GW55 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 SOCS2O14508 198 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 PTBP3O95758 552 aaKnown RBP19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L2P0CJ85 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L3P0CJ86 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L4P0CJ87 422 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L5P0CJ88 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L6P0CJ89 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L7P0CJ90 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 SDHAP31040 664 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 TRAM2Q15035 370 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 NANOGP8Q6NSW7 305 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 PGM2L1Q6PCE3 622 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4L9Q6RFH8 374 aaPredicted RBP19.03■□□□□ 0.64
PTPRA-208ENST00000455631 CALHM3Q86XJ0 350 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 PNKDQ8N490 385 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 GCSAMQ8N6F7 178 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 PLPP7Q8NBV4 271 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 PPP1R35Q8TAP8 253 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 PHF21AQ96BD5 680 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 VSX1Q9NZR4 365 aaPredicted RBP19.03■□□□□ 0.64
PTPRA-208ENST00000455631 KAAG1Q9UBP8 84 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 DUX4Q9UBX2 424 aa19.03■□□□□ 0.64
PTPRA-208ENST00000455631 MEIOCA2RUB1 952 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 H3BUX3 64 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 GRPP07492 148 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 SAA4P35542 130 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 NSUN5P1Q3KNT7 163 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 KRTAP27-1Q3LI81 207 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 CFAP77Q6ZQR2 320 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 NAA40Q86UY6 237 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 LY6G5BQ8NDX9 201 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 OR4S1Q8NGB4 309 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 OR2T6Q8NHC8 308 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 ACOT11Q8WXI4 607 aaPredicted RBP19.02■□□□□ 0.64
PTPRA-208ENST00000455631 LZICQ8WZA0 190 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 PITX2Q99697 317 aa19.02■□□□□ 0.64
PTPRA-208ENST00000455631 CD300LBA8K4G0 201 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 J3KTA2 159 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 GMDSO60547 372 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 VSIG10L2P0DP72 767 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 CYLC2Q14093 348 aaPredicted RBP19.01■□□□□ 0.63
PTPRA-208ENST00000455631 GPR139Q6DWJ6 353 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 C11orf87Q6NUJ2 197 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 ERICH5Q6P6B1 374 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 TBPL2Q6SJ96 375 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 PTCHD4Q6ZW05 846 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 ADCK1Q86TW2 530 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 LINC00346Q8IVM7 164 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 RNF113BQ8IZP6 322 aaKnown RBP19.01■□□□□ 0.63
PTPRA-208ENST00000455631 TSPEARQ8WU66 669 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 TSSK2Q96PF2 358 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 ATF6BQ99941 703 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 SH3GL1Q99961 368 aa19.01■□□□□ 0.63
PTPRA-208ENST00000455631 A0A087WUU8 490 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 GGT2P36268 569 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 KIR2DS4P43632 304 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 ELF3P78545 371 aaPredicted RBP19■□□□□ 0.63
PTPRA-208ENST00000455631 TRAP1Q12931 704 aaKnown RBP19■□□□□ 0.63
PTPRA-208ENST00000455631 LY6EQ16553 131 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 TEX36Q5VZQ5 186 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 TMPRSS11FQ6ZWK6 438 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 MBOAT2Q6ZWT7 520 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 TLCD1Q96CP7 247 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 CLPTM1LQ96KA5 538 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 CCL13Q99616 98 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 SNX13Q9Y5W8 968 aa19■□□□□ 0.63
PTPRA-208ENST00000455631 GGT3PA6NGU5 568 aa18.99■□□□□ 0.63
PTPRA-208ENST00000455631 NDUFB2O95178 105 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms