RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ATE1O95260 518 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 IGLV1-44P01699 117 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SERPINA5P05154 406 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 CECR9P0C854 216 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 CALCRP30988 508 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 TGM4P49221 684 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 GDI2P50395 445 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF83P51522 516 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 LSM3P62310 102 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 GRB2P62993 217 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 BDH1Q02338 343 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 CTF1Q16619 201 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 FBXL19-AS1Q494R0 122 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 TIMM23BQ5SRD1 257 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 FAM27D1Q5T7N8 215 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 RPL22L1Q6P5R6 122 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 TMEM91Q6ZNR0 172 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 C17orf78Q8N4C9 275 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 LINC01560Q8TB33 94 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ASB5Q8WWX0 329 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SMIM19Q96E16 107 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF799Q96GE5 643 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 WACQ9BTA9 647 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 HDHD5Q9BXW7 423 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 OR51B6Q9H340 312 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 NDUFB11Q9NX14 153 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 CRNNQ9UBG3 495 aaPredicted RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 OR52A1Q9UKL2 312 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ANKHD1Q8IWZ3 2542 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 A0A1B0GTI1 187 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 A0A1W2PPW3 197 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ANKRD61A6NGH8 418 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SLC22A1O15245 554 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ANXA2P07355 339 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 PCSK6P29122 969 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 DCTDP32321 178 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SLC6A9P48067 706 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SPOCK1Q08629 439 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 PPA1Q15181 289 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 TIMM50Q3ZCQ8 353 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 CCDC58Q4VC31 144 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 DOPEY1Q5JWR5 2465 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 ELMOD2Q8IZ81 293 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SLC30A7Q8NEW0 376 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 STEAP2Q8NFT2 490 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 OR2AE1Q8NHA4 323 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 UFD1Q92890 307 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 RNASE6Q93091 150 aaKnown RBP9.5□□□□□ -0.89
SCN9A-205ENST00000454569 SGK3Q96BR1 496 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 DCUN1D5Q9BTE7 237 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 STARD10Q9Y365 291 aa9.5□□□□□ -0.89
SCN9A-205ENST00000454569 DCHS2Q6V1P9 2916 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 LOC100506127A0A0U1RQW1 187 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 IQCMA0A1B0GVH7 501 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 A0A1W2PPK0 400 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 SHISA3A0PJX4 238 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 A6NIN4 97 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 M0R1B8 84 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 COX5BP10606 129 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF35P13682 527 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 ERVS71-1P61550 626 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 ECH1Q13011 328 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 TNK1Q13470 666 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 COLCA1Q6ZS62 124 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 WFDC8Q8IUA0 241 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 CCDC36Q8IYA8 594 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 OR5AK2Q8NH90 309 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 ABHD4Q8TB40 342 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 OR51E1Q8TCB6 317 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 SPTSSAQ969W0 71 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 MRPL48Q96GC5 212 aaKnown RBP9.49□□□□□ -0.89
SCN9A-205ENST00000454569 CHCHD6Q9BRQ6 235 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 CENPOQ9BU64 300 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 C1QTNF5Q9BXJ0 243 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 KCNJ16Q9NPI9 418 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 CRIM1Q9NZV1 1036 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 AMDHD2Q9Y303 409 aa9.49□□□□□ -0.89
SCN9A-205ENST00000454569 DPRXA6NFQ7 191 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 TRIM64BA6NI03 449 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 PIN1P1O15428 100 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 TBX1O43435 398 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 SC5DO75845 299 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 CLDN14O95500 239 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 IGLV3-1P01715 115 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 LCATP04180 440 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 FAM157BP0CG42 384 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 PSMA1P25786 263 aaKnown RBP9.48□□□□□ -0.89
SCN9A-205ENST00000454569 HOXC12P31275 282 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 CCR9P51686 369 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 TPTEP56180 551 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 TAS2R43P59537 309 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 VBP1P61758 197 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 NCS1P62166 190 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 PLP2Q04941 152 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 GPR50Q13585 617 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 SPCS2Q15005 226 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 GFOD2Q3B7J2 385 aa9.48□□□□□ -0.89
SCN9A-205ENST00000454569 ZNF829Q3KNS6 432 aaPredicted RBP9.48□□□□□ -0.89
SCN9A-205ENST00000454569 TMEM255AQ5JRV8 349 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms