RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 NEK7Q8TDX7 302 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 METTL8Q9H825 291 aaKnown RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 CHMP1AQ9HD42 196 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 OR2S2Q9NQN1 319 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 PADI1Q9ULC6 663 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 CACNA1DQ01668 2161 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 IGHV3-64DA0A0J9YX35 117 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 TRBV5-5A0A0J9YX44 114 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 SULT1B1O43704 296 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 PRAF2O60831 178 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 CFDP00746 253 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 UBCP0CG48 685 aaKnown RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 VSIG10L2P0DP72 767 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 M6PRP20645 277 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 AVPR2P30518 371 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 HRH1P35367 487 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 PLPPR5Q32ZL2 321 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 AKIRIN2Q53H80 203 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 WIPI1Q5MNZ9 446 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 RTN4RL2Q86UN3 420 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 RELL2Q8NC24 303 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 MRI1Q9BV20 369 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 PCED1AQ9H1Q7 454 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 ZFP64Q9NPA5 681 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 FAM166BA8MTA8 275 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 TO15178 435 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 ANGPTL7O43827 346 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 OR3A4PP47883 348 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 MAP2K6P52564 334 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 ARHGDIBP52566 201 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 BTN1A1Q13410 526 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF684Q5T5D7 378 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 GLDNQ6ZMI3 551 aaPredicted RBP10.64□□□□□ -0.71
SMPD4-213ENST00000454468 TTC9Q92623 222 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 FER1L5A0AVI2 2057 aa10.64□□□□□ -0.71
SMPD4-213ENST00000454468 OR2M5A3KFT3 312 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 NDUFB6O95139 128 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 B4GALT1P15291 398 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 ACHEP22303 614 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 DUSP3P51452 185 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-213ENST00000454468 PER3P56645 1201 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 ZP1P60852 638 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 S100A10P60903 97 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 C2orf68Q2NKX9 166 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 DCAF12L2Q5VW00 463 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 ELP2Q6IA86 826 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 TEX261Q6UWH6 196 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 GLRX5Q86SX6 157 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 SLC22A24Q8N4F4 322 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 AKR7LQ8NHP1 331 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 THRSPQ92748 146 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 ZBTB8AQ96BR9 441 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 U3KQ87 197 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 MEIKINA0A087WXM9 373 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 C7orf66A4D0T2 115 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 PMS2P1A4D2B8 440 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 RP2O75695 350 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 LDOC1O95751 146 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-213ENST00000454468 TTRP02766 147 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 SFTPBP07988 381 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 ICAM2P13598 275 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 CSNK2A1P68400 391 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-213ENST00000454468 PLGLB1Q02325 96 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 THEM4Q5T1C6 240 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF468Q5VIY5 522 aaPredicted RBP10.63□□□□□ -0.71
SMPD4-213ENST00000454468 C3P1Q6ZMU1 363 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 IL22RA1Q8N6P7 574 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 CSNK2A3Q8NEV1 391 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 NUBPLQ8TB37 319 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 TOMM40LQ969M1 308 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 TMEM59Q9BXS4 323 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 GPR173Q9NS66 373 aa10.63□□□□□ -0.71
SMPD4-213ENST00000454468 D6RAR5 112 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 LPLP06858 475 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 BLVRBP30043 206 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-213ENST00000454468 ZNF84P51523 738 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SLC35A1P78382 337 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 FAM74A1Q5RGS3 127 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 PMS2CLQ68D20 193 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 TMPPEQ6ZT21 453 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 TMEM17Q86X19 198 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 C20orf196Q8IYI0 205 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 GPR137CQ8N3F9 429 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 NOXO1Q8NFA2 376 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 ELP5Q8TE02 316 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 RAB3CQ96E17 227 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 RADILQ96JH8 1075 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 PLA2G3Q9NZ20 509 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 BDP1A6H8Y1 2624 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 A0A096LPE4 126 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 A0A1W2PPC1 479 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 A0A1W2PPZ6 126 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 H3BMH7 237 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 STK17BO94768 372 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 SCGB1D2O95969 90 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 PDGFAP04085 211 aa10.62□□□□□ -0.71
SMPD4-213ENST00000454468 POU3F2P20265 443 aaPredicted RBP10.62□□□□□ -0.71
SMPD4-213ENST00000454468 ZBTB37Q5TC79 503 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms