RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 DNAH1Q9P2D7 4330 aa14.04□□□□□ -0.16
UBE2D4-209ENST00000454428 IGHV3OR15-7A0A075B7D8 119 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 HTR3EA5X5Y0 456 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 CDC42EP2O14613 210 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 CD14P08571 375 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 ACSM4P0C7M7 580 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 PRKCDQ05655 676 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 OR8G1Q15617 311 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 MEP1BQ16820 701 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 ANKDD1AQ495B1 522 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 TEX36Q5VZQ5 186 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 WDR93Q6P2C0 686 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 CORO6Q6QEF8 472 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 OAFQ86UD1 273 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 SLCO4A1Q96BD0 722 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 AJUBAQ96IF1 538 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 ZNF583Q96ND8 569 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 CCDC28BQ9BUN5 200 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 HDHD2Q9H0R4 259 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 TRIM36Q9NQ86 728 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 C1orf123Q9NWV4 160 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 BAG5Q9UL15 447 aa14.03□□□□□ -0.16
UBE2D4-209ENST00000454428 EFCAB9A8MZ26 197 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 H3BUX3 64 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 KHDRBS3O75525 346 aaKnown RBP14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 SLC9A3P48764 834 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 SLC18A1P54219 525 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 GUCA2AQ02747 115 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 PLPP7Q8NBV4 271 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 GJC3Q8NFK1 279 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 ZNF570Q96NI8 536 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 ADAT1Q9BUB4 502 aaKnown RBP14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 RERGLQ9H628 205 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 VSX1Q9NZR4 365 aaPredicted RBP14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 RPS6KA6Q9UK32 745 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 MAB21L2Q9Y586 359 aa14.02□□□□□ -0.17
UBE2D4-209ENST00000454428 MEIOCA2RUB1 952 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 XKRYO14609 159 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 VSIG10L2P0DP72 767 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 CD28P10747 220 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 ST3GAL3Q11203 375 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 KRR1Q13601 381 aaKnown RBP14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 LY6EQ16553 131 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 CFAP77Q6ZQR2 320 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 PTCHD4Q6ZW05 846 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 SPERTQ8NA61 448 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 BEND2Q8NDZ0 799 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 OR4S1Q8NGB4 309 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 OR4C13Q8NGP0 309 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 WIPF2Q8TF74 440 aaPredicted RBP14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 PRRC1Q96M27 445 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 CCL13Q99616 98 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 NUAK2Q9H093 628 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 NMNAT1Q9HAN9 279 aaPredicted RBP14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 RHCGQ9UBD6 479 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 NDUFAF1Q9Y375 327 aa14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 HUWE1Q7Z6Z7 4374 aaKnown RBP14.01□□□□□ -0.17
UBE2D4-209ENST00000454428 CD300LBA8K4G0 201 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 DCTN6O00399 190 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 FFAR1O14842 300 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 PAHP00439 452 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 AMY2BP19961 511 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 EEF1B2P24534 225 aaKnown RBP14□□□□□ -0.17
UBE2D4-209ENST00000454428 RPL4P36578 427 aaKnown RBP14□□□□□ -0.17
UBE2D4-209ENST00000454428 PGAP1Q75T13 922 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 ZSCAN2Q7Z7L9 614 aaPredicted RBP14□□□□□ -0.17
UBE2D4-209ENST00000454428 FAM216BQ8N7L0 139 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 OR2T6Q8NHC8 308 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 SPRYD4Q8WW59 207 aaPredicted RBP14□□□□□ -0.17
UBE2D4-209ENST00000454428 RORBQ92753 470 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 R3HDM4Q96D70 268 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 DMRTB1Q96MA1 342 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 C7orf26Q96N11 449 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 WWC2-AS2Q96NR7 200 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 TSSK2Q96PF2 358 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 SSX3Q99909 188 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 RANBP3Q9H6Z4 567 aaPredicted RBP14□□□□□ -0.17
UBE2D4-209ENST00000454428 PNRC2Q9NPJ4 139 aaKnown RBP14□□□□□ -0.17
UBE2D4-209ENST00000454428 ADA2Q9NZK5 511 aa14□□□□□ -0.17
UBE2D4-209ENST00000454428 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 J3KTA2 159 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 CHST1O43916 411 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 GMDSO60547 372 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 PPP1R3DO95685 299 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 IGLL1P15814 213 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 PAX6P26367 422 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 GPR4P46093 362 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 YAP1P46937 504 aaKnown RBP13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 UBE2E1P51965 193 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 NFYCQ13952 458 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 PCK2Q16822 640 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 ZBED5Q49AG3 693 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 WDR38Q5JTN6 314 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 ZBTB37Q5TC79 503 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 HCP5Q6MZN7 132 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 TBPL2Q6SJ96 375 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 C11orf53Q8IXP5 236 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 C8orf46Q8TAG6 207 aa13.99□□□□□ -0.17
UBE2D4-209ENST00000454428 SEH1LQ96EE3 360 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms