RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 EFCAB10A6NFE3 127 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 H7C417 338 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 M0R233 179 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 TMPRSS2O15393 492 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 WBP4O75554 376 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ATE1O95260 518 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 IGHV3-13P01766 116 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 LCATP04180 440 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 RPSAP08865 295 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 TACSTD2P09758 323 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 PSKH1P11801 424 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 PIPP12273 146 aaPredicted RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 CCL2P13500 99 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 RAC2P15153 192 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 CD53P19397 219 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 MYF6P23409 242 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 DCKP27707 260 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 RPS27P42677 84 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 SLC6A9P48067 706 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 CX3CR1P49238 355 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 PPOXP50336 477 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 RIDAP52758 137 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 KRTAP10-9P60411 292 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ID3Q02535 119 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 OTPQ5XKR4 325 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 VHLLQ6RSH7 139 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 FBXW12Q6X9E4 464 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 RFPL4BQ6ZWI9 263 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 FAM220AQ7Z4H9 259 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF101Q8IZC7 436 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF283Q8N7M2 679 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 OR10H4Q8NGA5 316 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 SNX33Q8WV41 574 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 APH1BQ8WW43 257 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 NEUROG1Q92886 237 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 UBE2FQ969M7 185 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 TRMT61AQ96FX7 289 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 MARS2Q96GW9 593 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF184Q99676 751 aaPredicted RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 OR10A2Q9H208 303 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 BARX1Q9HBU1 254 aaPredicted RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 FGF20Q9NP95 211 aaPredicted RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF701Q9NV72 531 aaPredicted RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 CNOT2Q9NZN8 540 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 IKZF2Q9UKS7 526 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 LAMP3Q9UQV4 416 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 NOP16Q9Y3C1 178 aaKnown RBP7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ARID1AO14497 2285 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 TACC2O95359 2948 aa7.48□□□□□ -1.21
COL28A1-205ENST00000453441 ARFGEF3Q5TH69 2177 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 FBN2P35556 2912 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 A0A1W2PPW3 197 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 PLSCR5A0PG75 271 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DAPL1A0PJW8 107 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 METTL15A6NJ78 407 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 KIAA1324LA8MWY0 1029 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 J3QRE1 110 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 OVOL3O00110 214 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 GPRIN2O60269 458 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 ANXA2P07355 339 aaKnown RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 SOD3P08294 240 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DBHP09172 617 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 MYL12AP19105 171 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 RAB6AP20340 208 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 KITLGP21583 273 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DDOSTP39656 456 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 PRKXP51817 358 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DBPQ10586 325 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 CDK5R2Q13319 367 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 RSPO1Q2MKA7 263 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DEFB113Q30KQ7 82 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 PCGF3Q3KNV8 242 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 C6orf52Q5T4I8 152 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 C11orf71Q6IPW1 123 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 LRRN1Q6UXK5 716 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 SYS1Q8N2H4 156 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 CCDC54Q8NEL0 328 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 SLC25A40Q8TBP6 338 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 KLF14Q8TD94 323 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 SLC7A6Q92536 515 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 HAVCR1Q96D42 359 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 LGALS12Q96DT0 336 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 WDR89Q96FK6 387 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 AMELYQ99218 206 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 FOXC2Q99958 501 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 OR2J1Q9GZK6 312 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 SLC22A4Q9H015 551 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 RAB1BQ9H0U4 201 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 DYNLRB1Q9NP97 96 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 MYOZ1Q9NP98 299 aaPredicted RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 CHCHD3Q9NX63 227 aaKnown RBP7.47□□□□□ -1.21
COL28A1-205ENST00000453441 SCN3BQ9NY72 215 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 BLOC1S6Q9UL45 172 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 KLHDC2Q9Y2U9 406 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 LRP12Q9Y561 859 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 CCDC168Q8NDH2 2452 aa7.47□□□□□ -1.21
COL28A1-205ENST00000453441 A0A0U1RQV5 110 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 TMEM269A0A1B0GVZ9 245 aa7.46□□□□□ -1.22
COL28A1-205ENST00000453441 A0A1W2PQL4 384 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms