RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 LRP5LA4QPB2 252 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 TVP23AA6NH52 213 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 RNF212BA8MTL3 300 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 LYNX1G3V0Z9 82 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 PHYHO14832 338 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 FAM157BP0CG42 384 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 LIMS3P0CW19 117 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 LIMS4P0CW20 117 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 LYNX1P0DP58 116 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 CCL2P13500 99 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 MAP2K4P45985 399 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 PCK2Q16822 640 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 TEX30Q5JUR7 227 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 OR6N2Q8NGY6 317 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 SPATA3Q8NHX4 192 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 RORBQ92753 470 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF649Q9BS31 505 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 OR51B6Q9H340 312 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 UGT2A1Q9Y4X1 527 aa15.43■□□□□ 0.06
SQSTM1-204ENST00000453046 DAPL1A0PJW8 107 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF670-ZNF695F2Z2N8 137 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 LCKP06239 509 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF823P16415 610 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 HNF1AP20823 631 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 APLNRP35414 380 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 RAD52P43351 418 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ETV1P50549 477 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ACTA2P62736 377 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ACTG2P63267 376 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 GALEQ14376 348 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 KCNMB1Q16558 191 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 NKPD1Q17RQ9 610 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 KLHL36Q8N4N3 616 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 NANOGP1Q8N7R0 232 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF454Q8N9F8 522 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 OTOSQ8NHW6 89 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 ALG8Q9BVK2 526 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 SIAEQ9HAT2 523 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 POLE4Q9NR33 117 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 BATF3Q9NR55 127 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 MYEF2Q9P2K5 600 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 CLEC2DQ9UHP7 191 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 GPR160Q9UJ42 338 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 LSM2Q9Y333 95 aaKnown RBP15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 CAB39Q9Y376 341 aaPredicted RBP15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 CUBNO60494 3623 aa15.42■□□□□ 0.06
SQSTM1-204ENST00000453046 A0A1W2PQL4 384 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 GPANK1O95872 356 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 SRD5A1P18405 259 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 MSR1P21757 451 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 CCNOP22674 350 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 APEX1P27695 318 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 CDAP32320 146 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 GUCA1AP43080 201 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 WNT4P56705 351 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 MRPS34P82930 218 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF85Q03923 595 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 SGCAQ16586 387 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 ALKBH6Q3KRA9 238 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 SLC18B1Q6NT16 456 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 TMPRSS11AQ6ZMR5 421 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 IL17RELQ6ZVW7 336 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 EGFL6Q8IUX8 553 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 PAQR4Q8N4S7 273 aaPredicted RBP15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 C11orf40Q8WZ69 217 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 TBX5Q99593 518 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 TAAR3PQ9P1P4 343 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 COPS3Q9UNS2 423 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 MALRD1Q5VYJ5 2156 aa15.41■□□□□ 0.06
SQSTM1-204ENST00000453046 MXRA5Q9NR99 2828 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 LILRA1O75019 489 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 HPXP02790 462 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 SPARCP09486 303 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 TACSTD2P09758 323 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 NAT2P11245 290 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 KLF3P57682 345 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 LSM6P62312 80 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 RIN1Q13671 783 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 FAM120AOSQ5T036 256 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 SYT6Q5T7P8 510 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 ZNF322Q6U7Q0 402 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 DPY19L4Q7Z388 723 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 LHFPL3Q86UP9 236 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 SYS1Q8N2H4 156 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 SYNPRQ8TBG9 265 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 SNX33Q8WV41 574 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 ASB17Q8WXJ9 295 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 TMEM158Q8WZ71 300 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 RDH5Q92781 318 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 HPS1Q92902 700 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 BCL2L14Q9BZR8 327 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 LAMP5Q9UJQ1 280 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 POLR1DQ9Y2S0 133 aa15.4■□□□□ 0.06
SQSTM1-204ENST00000453046 SVEP1Q4LDE5 3571 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 ZNF593O00488 134 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 INMTO95050 263 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 MMP7P09237 267 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 PSKH1P11801 424 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 ALOX5APP20292 161 aa15.39■□□□□ 0.05
SQSTM1-204ENST00000453046 PSMB9P28065 219 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms