RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 RHBDL1O75783 438 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 GLCEO94923 617 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 HLA-DPB1P04440 258 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 TPM3P06753 285 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ELANEP08246 267 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 GKN3PP0CG01 181 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SDC1P18827 310 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 PRPH2P23942 346 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ECHS1P30084 290 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 HMOX2P30519 316 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SPRP35270 261 aaPredicted RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 CDX1P47902 265 aaPredicted RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 CENPAP49450 140 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ZNF75DP51815 510 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 EWSR1Q01844 656 aaKnown RBP eCLIP2.5□□□□□ -2.01
PMS1-215ENST00000447232 PDIA2Q13087 525 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 NAB1Q13506 487 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 HHATQ5VTY9 493 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ATG16L1Q676U5 607 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 OR2T2Q6IF00 324 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 C5orf46Q6UWT4 87 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 GPRIN3Q6ZVF9 776 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CYS1Q717R9 158 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 KLHL7Q8IXQ5 586 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ZNF440Q8IYI8 595 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CADM2Q8N3J6 435 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CLDN22Q8N7P3 220 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 FBXO36Q8NEA4 188 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 OR6S1Q8NH40 331 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 OR5AK3PQ8NH89 298 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 OR5P2Q8WZ92 322 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 MCHR2Q969V1 340 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ZNF566Q969W8 418 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ROPN1LQ96C74 230 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 MALSU1Q96EH3 234 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 DUS3LQ96G46 650 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 SLC25A44Q96H78 314 aaPredicted RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 ZNF582Q96NG8 517 aaPredicted RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 KCNA7Q96RP8 456 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SEPHS2Q99611 448 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CCL13Q99616 98 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CCT7Q99832 543 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CCNB1IP1Q9NPC3 277 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 TXNDC16Q9P2K2 825 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 UGT2A1Q9Y4X1 527 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 TIMM22Q9Y584 194 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SH2D7A6NKC9 451 aaPredicted RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 ODF3BA8MYP8 253 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 EPM2AB3EWF7 344 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 C12orf77C9JDV5 145 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 E7ESA3 106 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 PLPP3O14495 311 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 DOK2O60496 412 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ENO1P06733 434 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 PRG2P13727 222 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SELLP14151 372 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 NQO1P15559 274 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 FPR3P25089 353 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 GSK3BP49841 420 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ERVK-25P63136 954 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 TPM4P67936 248 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 BLOC1S1P78537 153 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 BLMHQ13867 455 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SSX2Q16385 188 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SPDYE7PQ495Y7 208 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 WDR38Q5JTN6 314 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 C10orf128Q5T292 105 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 GRTP1Q5TC63 336 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 KLC3Q6P597 504 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CCDC137Q6PK04 289 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 C6orf120Q7Z4R8 191 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 MKXQ8IYA7 352 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ZDHHC23Q8IYP9 409 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 BOLLQ8N9W6 283 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 OR6Q1Q8NGQ2 317 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 ACOT11Q8WXI4 607 aaPredicted RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 SLC38A4Q969I6 547 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 MAGOHBQ96A72 148 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 EME1Q96AY2 570 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 COG8Q96MW5 612 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 CCDC115Q96NT0 180 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 MRPL13Q9BYD1 178 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 SLC38A1Q9H2H9 487 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 OR51I1Q9H343 314 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 RLIMQ9NVW2 624 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 MRPL39Q9NYK5 338 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 ATP6V1HQ9UI12 483 aa2.5□□□□□ -2.01
PMS1-215ENST00000447232 TBL2Q9Y4P3 447 aaKnown RBP2.5□□□□□ -2.01
PMS1-215ENST00000447232 TRAV36DV7A0A075B6V5 113 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 IGHV3OR15-7A0A075B7D8 119 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 TCRBV9S1A1TA0A576 114 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 A8MT66 165 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 H0YAE9 185 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 H3BSH0 61 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.49□□□□□ -2.01
PMS1-215ENST00000447232 AP4M1O00189 453 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 ACOT8O14734 319 aa2.49□□□□□ -2.01
PMS1-215ENST00000447232 NDUFB3O43676 98 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms