RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 IRF2P14316 349 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 EGR1P18146 543 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 CA6P23280 308 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 MAGEA2P43356 314 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 PITPNBP48739 271 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 HMGA2P52926 109 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 ZNF92Q03936 586 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 BAMBIQ13145 260 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 OR8G1Q15617 311 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 ZNF362Q5T0B9 420 aaPredicted RBP15.19■□□□□ 0.02
COL9A1-205ENST00000447041 ZNF770Q6IQ21 691 aaPredicted RBP15.19■□□□□ 0.02
COL9A1-205ENST00000447041 LRRN1Q6UXK5 716 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 CELF2-AS1Q8N7Q2 184 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 OR2T4Q8NH00 348 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 RAB40AQ8WXH6 277 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 SPTSSAQ969W0 71 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 PLEKHA8Q96JA3 519 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 ADAT1Q9BUB4 502 aaKnown RBP15.19■□□□□ 0.02
COL9A1-205ENST00000447041 MS4A7Q9GZW8 240 aaPredicted RBP15.19■□□□□ 0.02
COL9A1-205ENST00000447041 TBC1D23Q9NUY8 699 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 NDE1Q9NXR1 346 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 IL20Q9NYY1 176 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 PCDHGB1Q9Y5G3 927 aa15.19■□□□□ 0.02
COL9A1-205ENST00000447041 TCRBV5S2A0A599 114 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 CD300LBA8K4G0 201 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 DCTN3O75935 186 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 CCNB2O95067 398 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 GYPBP06028 91 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 CPT2P23786 658 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 OTX1P32242 354 aaPredicted RBP15.18■□□□□ 0.02
COL9A1-205ENST00000447041 CRMP1Q14194 572 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 GLYATL3Q5SZD4 288 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 DCDC5Q6ZRR9 648 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 RASSF6Q6ZTQ3 369 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 NLRC3Q7RTR2 1065 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 DCXRQ7Z4W1 244 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 PIGWQ7Z7B1 504 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 OR11L1Q8NGX0 322 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 OR4Q3Q8NH05 313 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 ERGIC1Q969X5 290 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 UPRTQ96BW1 309 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 TRIM15Q9C019 465 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 VNN3Q9NY84 501 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 ACTR3BQ9P1U1 418 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 CLN8Q9UBY8 286 aa15.18■□□□□ 0.02
COL9A1-205ENST00000447041 MDFIC2A0A1B0GVS7 189 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 SPRY1O43609 319 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-205ENST00000447041 SOX14O95416 240 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 PLATP00750 562 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 SPARCP09486 303 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 PPIAL4GP0DN37 164 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 SLC2A1P11166 492 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 SPATS1Q496A3 300 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 WDR25Q64LD2 544 aaPredicted RBP15.17■□□□□ 0.02
COL9A1-205ENST00000447041 DRAM2Q6UX65 266 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 ZNF841Q6ZN19 808 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 LINC00471Q8N535 108 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 AQP11Q8NBQ7 271 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 NUDT16L1Q9BRJ7 211 aaKnown RBP15.17■□□□□ 0.02
COL9A1-205ENST00000447041 COPS4Q9BT78 406 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 TSSK6Q9BXA6 273 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 ZMAT3Q9HA38 289 aaKnown RBP15.17■□□□□ 0.02
COL9A1-205ENST00000447041 ARMC1Q9NVT9 282 aa15.17■□□□□ 0.02
COL9A1-205ENST00000447041 GGT3PA6NGU5 568 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 C22orf46C9J442 243 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 PHYHO14832 338 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 RNASE1P07998 156 aaKnown RBP15.16■□□□□ 0.02
COL9A1-205ENST00000447041 CLUP10909 449 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 ENTPD1P49961 510 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 PRKXP51817 358 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 FOXL1Q12952 345 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 C9orf139Q6ZV77 190 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 LNX2Q8N448 690 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 FITM2Q8N6M3 262 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 ZNF511Q8NB15 262 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 SGMS2Q8NHU3 365 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 TAF15Q92804 592 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL9A1-205ENST00000447041 SLAMF6Q96DU3 332 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 SLC22A4Q9H015 551 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 MMADHCQ9H3L0 296 aaPredicted RBP15.16■□□□□ 0.02
COL9A1-205ENST00000447041 CTSZQ9UBR2 303 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 U3KQV3 271 aa15.16■□□□□ 0.02
COL9A1-205ENST00000447041 KIR2DS1A0A191URI9 304 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 SPI1P17947 270 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 PSMB10P40306 273 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 SLC9A3R2Q15599 337 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 SFRP4Q6FHJ7 346 aaPredicted RBP15.15■□□□□ 0.02
COL9A1-205ENST00000447041 BRD3OSQ6XYD6 125 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 SPATC1Q76KD6 591 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 BOLLQ8N9W6 283 aaKnown RBP15.15■□□□□ 0.02
COL9A1-205ENST00000447041 OR56B2PQ8NGI1 322 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 TECTBQ96PL2 329 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 NMNAT2Q9BZQ4 307 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 FN3KRPQ9HA64 309 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 CENPMQ9NSP4 180 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 RNF7Q9UBF6 113 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 NOP16Q9Y3C1 178 aaKnown RBP15.15■□□□□ 0.02
COL9A1-205ENST00000447041 N6AMT1Q9Y5N5 214 aa15.15■□□□□ 0.02
COL9A1-205ENST00000447041 DOCK11Q5JSL3 2073 aa15.14■□□□□ 0.01
COL9A1-205ENST00000447041 B2RBV5 119 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms