RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CLIP1P30622 1438 aa3.26□□□□□ -1.89
HMGB1P48-201ENST00000446155 KIF14Q15058 1648 aa3.26□□□□□ -1.89
HMGB1P48-201ENST00000446155 MYO3BQ8WXR4 1341 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ASXL1Q8IXJ9 1541 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 SEC14L6B5MCN3 397 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ANKRD63C9JTQ0 380 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ANKRD65E5RJM6 399 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 F8VP50 259 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 TOR1AO14656 332 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 B4GALT5O43286 388 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ALOX12BO75342 701 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 SERF1AO75920 110 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 LDOC1O95751 146 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 PNMA6AP0CW24 399 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 IGFBP3P17936 291 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 GABRG2P18507 467 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 USF1P22415 310 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 COX7A1P24310 79 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 HRH1P35367 487 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 UGT2B10P36537 528 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 RANBP1P43487 201 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF121P58317 390 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 TAS2R39P59534 338 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 UBE2KP61086 200 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 VSNL1P62760 191 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 RPS21P63220 83 aaKnown RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 UBE2IP63279 158 aaKnown RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 C2orf80Q0P641 193 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 FZD2Q14332 565 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 MAPRE2Q15555 327 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 GSG1Q2KHT4 349 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 CPTPQ5TA50 214 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ANKRD22Q5VYY1 191 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 LCN12Q6JVE5 192 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 RFLNAQ6ZTI6 216 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 CDKL3Q8IVW4 592 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR51A7Q8NH64 312 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 TNFRSF14Q92956 283 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 LRRC45Q96CN5 670 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 FAM122AQ96E09 287 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 B3GALT6Q96L58 329 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF681Q96N22 645 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 UQCC2Q9BRT2 126 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 TIMM29Q9BSF4 260 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF702PQ9H963 129 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 MARCH5Q9NX47 278 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 VAPAQ9P0L0 249 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 URGCP-MRPS24S4R325 110 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 LRRK1Q38SD2 2015 aa3.25□□□□□ -1.89
HMGB1P48-201ENST00000446155 MYO5CQ9NQX4 1742 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 KDM5AP29375 1690 aaKnown RBP3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 CTTNBP2Q8WZ74 1663 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 CAMTA1Q9Y6Y1 1673 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 MYOM2P54296 1465 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 TRAV8-7A0A075B6U6 113 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 C1orf232A0A0U1RR37 186 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 ANKRD20A5PA0PJZ0 165 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 MKRN2OSH3BPM6 223 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 DFFAO00273 331 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PHOX2AO14813 284 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PGAM1P18669 254 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 F2RP25116 425 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 CD40LGP29965 261 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 MAS1LP35410 378 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PCK1P35558 622 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PRLHRP49683 370 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 HCCSP53701 268 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PLTPP55058 493 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 RPL31P62899 125 aaKnown RBP3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF45Q02386 682 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZSCAN26Q16670 478 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 C5orf47Q569G3 176 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 EOGTQ5NDL2 527 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 SSX6Q7RTT6 188 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 MRPL55Q7Z7F7 128 aaKnown RBP3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 SETD3Q86TU7 594 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 OAFQ86UD1 273 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 NELFCDQ8IXH7 590 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 FAM71AQ8IYT1 594 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 TMEM61Q8N0U2 210 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PNKDQ8N490 385 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 KLHL30-AS1Q8NEE0 82 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 OR6Q1Q8NGQ2 317 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 GEMIN6Q8WXD5 167 aaKnown RBP3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 FAM3DQ96BQ1 224 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 RCN3Q96D15 328 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 C8orf76Q96K31 380 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF514Q96K75 400 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 ZNF75AQ96N20 296 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 CIB1Q99828 191 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 CTRCQ99895 268 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 COPS4Q9BT78 406 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 PAXXQ9BUH6 204 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 GABARAPL3Q9BY60 117 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 REEP1Q9H902 201 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 SCML1Q9UN30 329 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 FADS3Q9Y5Q0 445 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 DCCP43146 1447 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 GLI3P10071 1580 aa3.24□□□□□ -1.89
HMGB1P48-201ENST00000446155 LRPPRCP42704 1394 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms