RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 TMEM45BQ96B21 275 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 KCNJ15Q99712 375 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 NAA11Q9BSU3 229 aaPredicted RBP5.27□□□□□ -1.57
PTPRR-204ENST00000440835 SRXN1Q9BYN0 137 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 QRSL1Q9H0R6 528 aaKnown RBP5.27□□□□□ -1.57
PTPRR-204ENST00000440835 PPP1R3EQ9H7J1 279 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 BCL2L10Q9HD36 194 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 TREM1Q9NP99 234 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 EMC7Q9NPA0 242 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 EQTNQ9NQ60 294 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 SLC35D1Q9NTN3 355 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 B3GALT5Q9Y2C3 310 aa5.27□□□□□ -1.57
PTPRR-204ENST00000440835 SERINC4A6NH21 518 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF670-ZNF695F2Z2N8 137 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF208O43345 1280 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 CDRT1O95170 752 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 HMGN2P05204 90 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 H2AFB1P0C5Y9 115 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 H2AFB2P0C5Z0 115 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 OR12D1P0DN82 309 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 GABRB1P18505 474 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 APOBEC3AP31941 199 aaPredicted RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ACVR1BP36896 505 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 RFX3P48380 749 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 RAB13P51153 203 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 MVDP53602 400 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 HNRNPA0Q13151 305 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 LASP1Q14847 261 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 RAB35Q15286 201 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 CD226Q15762 336 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 TMEM249Q2WGJ8 235 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 HFEQ30201 348 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ARHGAP11BQ3KRB8 267 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 BCL2L15Q5TBC7 163 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 TRIQKQ629K1 86 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 FAHD1Q6P587 224 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 C5orf46Q6UWT4 87 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SLC16A13Q7RTY0 426 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 Q8N402 240 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 TEX29Q8N6K0 151 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 LRRC17Q8N6Y2 441 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 C19orf18Q8NEA5 215 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 FAM71CQ8NEG0 241 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ABHD3Q8WU67 409 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 EDARADDQ8WWZ3 215 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 FAM168AQ92567 244 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 NSMAFQ92636 917 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 APH1AQ96BI3 265 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 TMEM19Q96HH6 336 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 EPYCQ99645 322 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 MED28Q9H204 178 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 GPATCH2Q9NW75 528 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 BABAM2Q9NXR7 383 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SLC25A15Q9Y619 301 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 WRBO00258 174 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 HMGN4O00479 90 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 PHF1O43189 567 aaPredicted RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 STX11O75558 287 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 EIF3GO75821 320 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 NUDT14O95848 222 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 DHFRP00374 187 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 APOC3P02656 99 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 NMBP08949 121 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 FGF2P09038 288 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 NUDT7P0C024 238 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 STAG3L3P0CL85 134 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 AQP1P29972 269 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SFTPDP35247 375 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 GGT2P36268 569 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 PDLIM4P50479 330 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 CASP9P55211 416 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 PCBP3P57721 371 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SPCS3P61009 180 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SLC35A1P78382 337 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 LSM11P83369 360 aaKnown RBP eCLIP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 GLO1Q04760 184 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SKP2Q13309 424 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SLC27A4Q6P1M0 643 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ZNF440Q8IYI8 595 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 LINC00471Q8N535 108 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 BVESQ8NE79 360 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 C10orf105Q8TEF2 133 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SLC38A5Q8WUX1 472 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 CDS1Q92903 461 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 MAL2Q969L2 176 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SLC25A46Q96AG3 418 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 MRPL48Q96GC5 212 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 OR7D2Q96RA2 312 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SOSTQ9BQB4 213 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 TMEM43Q9BTV4 400 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SF3B5Q9BWJ5 86 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 SAP130Q9H0E3 1048 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ASB6Q9NWX5 421 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 VSX1Q9NZR4 365 aaPredicted RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 GPR160Q9UJ42 338 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 PURGQ9UJV8 347 aaKnown RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 ING1Q9UK53 422 aaPredicted RBP5.26□□□□□ -1.57
PTPRR-204ENST00000440835 KCNK7Q9Y2U2 307 aa5.26□□□□□ -1.57
PTPRR-204ENST00000440835 C17orf51A8MQB3 221 aa5.25□□□□□ -1.57
PTPRR-204ENST00000440835 SHISA8B8ZZ34 492 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms