RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 NDUFAB1O14561 156 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 MAGEB4O15481 346 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 ZNF324O75467 553 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 CCNB2O95067 398 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 ERCC1P07992 297 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 FGF4P08620 206 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 RAB3BP20337 219 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 OTX1P32242 354 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 KIR3DL2P43630 455 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 RPS5P46782 204 aaKnown RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 ERCC8Q13216 396 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 TRAM2Q15035 370 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 PRMT9Q6P2P2 845 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 PP632Q6XCG6 107 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 CENPQQ7L2Z9 268 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 SCD5Q86SK9 330 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 TMEM150AQ86TG1 271 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 GABRG1Q8N1C3 465 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 OR4C5Q8NGB2 326 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 OR2A1Q8NGT9 310 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 TM4SF18Q96CE8 201 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 PDXPQ96GD0 296 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 DNAJC1Q96KC8 554 aaKnown RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 MICU1Q9BPX6 476 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 UCK2Q9BZX2 261 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 ACTR3CQ9C0K3 210 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 SLC7A5P2Q9GIP4 190 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 LINC00597Q9H2U6 94 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 SPNS1Q9H2V7 528 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 EDA2RQ9HAV5 297 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 CCNB1IP1Q9NPC3 277 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 CCDC59Q9P031 241 aaKnown RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 PDP1Q9P0J1 537 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 TSSC4Q9Y5U2 329 aaPredicted RBP2.1□□□□□ -2.07
VPS41-207ENST00000439468 CFAP54Q96N23 3096 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 GAKO14976 1311 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 UBN2Q6ZU65 1347 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 IGSF9BQ9UPX0 1349 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 KIF15Q9NS87 1388 aa2.1□□□□□ -2.07
VPS41-207ENST00000439468 UBR3Q6ZT12 1888 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 BCL9O00512 1426 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 AKAP11Q9UKA4 1901 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 PRXQ9BXM0 1461 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 IGKV6-21A0A0C4DH24 114 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 IGHV5-10-1A0A0J9YXX1 117 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 RSPH10B2B2RC85 870 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 H7C1H1 209 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 H7C417 338 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 WRBO00258 174 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 AIREO43918 545 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 CACNG3O60359 315 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 RP2O75695 350 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 CTDNEP1O95476 244 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 OXTP01178 125 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 HLA-DPB1P04440 258 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 ARG1P05089 322 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 CD3GP09693 182 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 RSPH10BP0C881 870 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 CSNK2A2P19784 350 aaPredicted RBP2.09□□□□□ -2.07
VPS41-207ENST00000439468 GSTM3P21266 225 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 STOMP27105 288 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 ESRRGP62508 458 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 SYCNQ0VAF6 134 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 CDH17Q12864 832 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 ITIH4Q14624 930 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 SF3A2Q15428 464 aaKnown RBP2.09□□□□□ -2.07
VPS41-207ENST00000439468 PSMD5Q16401 504 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 HSDL1Q3SXM5 330 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 NTM-AS1Q6ZSK4 140 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 BIVMQ86UB2 503 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 ARRDC1Q8N5I2 433 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 NPWQ8N729 165 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 PQLC3Q8N755 202 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 NOXO1Q8NFA2 376 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 OR9G4Q8NGQ1 327 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 NDFIP1Q9BT67 221 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 SAV1Q9H4B6 383 aaPredicted RBP2.09□□□□□ -2.07
VPS41-207ENST00000439468 ZNF430Q9H8G1 570 aaPredicted RBP2.09□□□□□ -2.07
VPS41-207ENST00000439468 TMEM165Q9HC07 324 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 LYARQ9NX58 379 aaKnown RBP2.09□□□□□ -2.07
VPS41-207ENST00000439468 MTCH1Q9NZJ7 389 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 RABL2AQ9UBK7 228 aaPredicted RBP2.09□□□□□ -2.07
VPS41-207ENST00000439468 MTFP1Q9UDX5 166 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 OR12D3Q9UGF7 316 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 TBC1D24Q9ULP9 559 aa2.09□□□□□ -2.07
VPS41-207ENST00000439468 SCN4AP35499 1836 aa2.09□□□□□ -2.08
VPS41-207ENST00000439468 C5orf42Q9H799 3197 aa2.09□□□□□ -2.08
VPS41-207ENST00000439468 WDR19Q8NEZ3 1342 aa2.09□□□□□ -2.08
VPS41-207ENST00000439468 MTUS2Q5JR59 1369 aa2.09□□□□□ -2.08
VPS41-207ENST00000439468 KIAA0232Q92628 1395 aa2.09□□□□□ -2.08
VPS41-207ENST00000439468 KDM6AO15550 1401 aaPredicted RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 CLIP1P30622 1438 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 CCDC18Q5T9S5 1454 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 DLEC1Q9Y238 1755 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 MUC6Q6W4X9 2439 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 SCAMP2O15127 329 aaKnown RBP2.08□□□□□ -2.08
VPS41-207ENST00000439468 MED6O75586 246 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 FOXH1O75593 365 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 CTAG2O75638 210 aa2.08□□□□□ -2.08
VPS41-207ENST00000439468 ADRA2AP08913 450 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms