RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 MFGE8Q08431 387 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-208ENST00000438518 ALKBH1Q13686 389 aaKnown RBP15.83■□□□□ 0.12
HDAC6-208ENST00000438518 MOGQ16653 247 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 TMEM200AQ86VY9 491 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 ZNF295-AS1Q8N0V1 137 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 SPARTQ8N0X7 666 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 ZNF611Q8N823 705 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 OR8B12Q8NGG6 310 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 OR2G2Q8NGZ5 317 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 SLC25A40Q8TBP6 338 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 SGCDQ92629 289 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 MARS2Q96GW9 593 aaKnown RBP15.83■□□□□ 0.12
HDAC6-208ENST00000438518 ISYNA1Q9NPH2 558 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 STARD10Q9Y365 291 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 RAI1Q7Z5J4 1906 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-208ENST00000438518 USP9YO00507 2555 aaPredicted RBP15.83■□□□□ 0.12
HDAC6-208ENST00000438518 DOPEY2Q9Y3R5 2298 aa15.83■□□□□ 0.12
HDAC6-208ENST00000438518 IGLV3-9A0A075B6K5 115 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 TMEM212A6NML5 194 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 GPRIN2O60269 458 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 PLAUP00749 431 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 IGLV3-1P01715 115 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 ISG15P05161 165 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 ZNF12P17014 697 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 THBS4P35443 961 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 MED22Q15528 200 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 EFNB3Q15768 340 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 WDR38Q5JTN6 314 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 TMEM244Q5VVB8 128 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 C20orf204Q6ZNR8 217 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 PGAP1Q75T13 922 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 ZNF367Q7RTV3 350 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 MRPL21Q7Z2W9 205 aaKnown RBP15.82■□□□□ 0.12
HDAC6-208ENST00000438518 KLBQ86Z14 1044 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 FBXL14Q8N1E6 418 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 LILRB1Q8NHL6 650 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-208ENST00000438518 SYNPRQ8TBG9 265 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 RPS4Y2Q8TD47 263 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 KLF14Q8TD94 323 aaPredicted RBP15.82■□□□□ 0.12
HDAC6-208ENST00000438518 GATAD2BQ8WXI9 593 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 MRPL24Q96A35 216 aaKnown RBP15.82■□□□□ 0.12
HDAC6-208ENST00000438518 OR2J1Q9GZK6 312 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 OR51B6Q9H340 312 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 VCX3AQ9NNX9 186 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 BRD7Q9NPI1 651 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 ACOT13Q9NPJ3 140 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 GPR160Q9UJ42 338 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 GTF2A1LQ9UNN4 478 aa15.82■□□□□ 0.12
HDAC6-208ENST00000438518 LSM2Q9Y333 95 aaKnown RBP15.82■□□□□ 0.12
HDAC6-208ENST00000438518 LOC390937A0A1W2PQ73 354 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 OGG1O15527 345 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 MTRF1O75570 445 aaKnown RBP15.81■□□□□ 0.12
HDAC6-208ENST00000438518 IGHV3-13P01766 116 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 TTRP02766 147 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 CD1AP06126 327 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 LIPAP38571 399 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 DDOSTP39656 456 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 PSMB10P40306 273 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 FABP6P51161 128 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 KLF3P57682 345 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-208ENST00000438518 EMX1Q04741 257 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-208ENST00000438518 GK2Q14410 553 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-208ENST00000438518 CDK5R1Q15078 307 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 ADIPOQQ15848 244 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 GLYATL3Q5SZD4 288 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 VHLLQ6RSH7 139 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 TSPAN14Q8NG11 270 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 RNF166Q96A37 237 aaPredicted RBP15.81■□□□□ 0.12
HDAC6-208ENST00000438518 SMIM19Q96E16 107 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 REEP6Q96HR9 211 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 REPIN1Q9BWE0 567 aaKnown RBP15.81■□□□□ 0.12
HDAC6-208ENST00000438518 COMMD4Q9H0A8 199 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 FRRS1LQ9P0K9 344 aa15.81■□□□□ 0.12
HDAC6-208ENST00000438518 TRBV2A0A0J9YWF9 115 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 DHRS7CA6NNS2 312 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 B9A039 149 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 OR4A8P0C604 315 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 KITLGP21583 273 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 CCL1P22362 96 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 TTKP33981 857 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 SERPINF1P36955 418 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 MLLT11Q13015 90 aaPredicted RBP15.8■□□□□ 0.12
HDAC6-208ENST00000438518 GPR50Q13585 617 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 AGAP6Q5VW22 663 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 Q6ZSR3 168 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 DOK3Q7L591 496 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 MUC15Q8N387 334 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 PRSS35Q8N3Z0 413 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 FTMTQ8N4E7 242 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 SGK3Q96BR1 496 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 HAVCR1Q96D42 359 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 PLK3Q9H4B4 646 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 PTTG3PQ9NZH4 202 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 ZNF319Q9P2F9 582 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 N6AMT1Q9Y5N5 214 aa15.8■□□□□ 0.12
HDAC6-208ENST00000438518 FASNP49327 2511 aaKnown RBP15.79■□□□□ 0.12
HDAC6-208ENST00000438518 SPTAN1Q13813 2472 aaKnown RBP15.79■□□□□ 0.12
HDAC6-208ENST00000438518 MAGEA13PA6NCF6 341 aa15.79■□□□□ 0.12
HDAC6-208ENST00000438518 OR4C45A6NMZ5 311 aa15.79■□□□□ 0.12
HDAC6-208ENST00000438518 PLPP2O43688 288 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms