RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ASXL3Q9C0F0 2248 aa1.72□□□□□ -2.13
HMGB1P31-201ENST00000437242 PTPRQQ9UMZ3 2332 aa1.72□□□□□ -2.13
HMGB1P31-201ENST00000437242 NYNRINQ9P2P1 1898 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 LRBAP50851 2863 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGLV4-69A0A075B6H9 119 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGKV1D-13A0A0B4J2D9 117 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 A0A1B0GVI7 797 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 PRSS37A4D1T9 235 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 LRCOL1A6NCL2 159 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF726A6NNF4 738 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CCDC169A6NNP5 214 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 I3L4J1 428 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 J3QKU1 62 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CASC3O15234 703 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF324O75467 553 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 SUPT3HO75486 399 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 WBP4O75554 376 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CIB2O75838 187 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 PLEKHA8P1O95397 391 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGKV1-13P0DP09 117 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 TROVE2P10155 538 aaKnown RBP eCLIP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 HSPD1P10809 573 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 TNNI1P19237 187 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 AK4P27144 223 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 GDI1P31150 447 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 HOXA9P31269 272 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 FOXN2P32314 431 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 SERPINB5P36952 375 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CXCL5P42830 114 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 RPS9P46781 194 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CXCL12P48061 93 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 SSR4P51571 173 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 SRSF6Q13247 344 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 AQP6Q13520 282 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 EIF4EBP1Q13541 118 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 TGFBIQ15582 683 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 TMEM183BQ1AE95 376 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZBED5Q49AG3 693 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 VPS26BQ4G0F5 336 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 LCN12Q6JVE5 192 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 RNASEKQ6P5S7 137 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 THOC6Q86W42 341 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 TMEM183AQ8IXX5 376 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 SDR9C7Q8NEX9 313 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 OR56B2PQ8NGI1 322 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 AKR7LQ8NHP1 331 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 RHEBL1Q8TAI7 183 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 PLPPR1Q8TBJ4 325 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 LKAAEAR1Q8TD35 194 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 ACTRT1Q8TDG2 376 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 GEMIN6Q8WXD5 167 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 N4BP2L2Q92802 583 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 TMEM54Q969K7 222 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 PIK3IP1Q96FE7 263 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 MBOAT7Q96N66 472 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 RARRES2Q99969 163 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 HDHD3Q9BSH5 251 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CDC42EP4Q9H3Q1 356 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 PRORYQ9H606 182 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 UGT1A7Q9HAW7 530 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 UGT1A10Q9HAW8 530 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 UGT1A8Q9HAW9 530 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 LHX9Q9NQ69 397 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CD84Q9UIB8 345 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 STARD10Q9Y365 291 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 UBIAD1Q9Y5Z9 338 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 URB1O60287 2271 aaKnown RBP1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 CELSR1Q9NYQ6 3014 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 ACACAQ13085 2346 aa1.71□□□□□ -2.14
HMGB1P31-201ENST00000437242 NFASCO94856 1347 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 TCHHQ07283 1943 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 DOCK9Q9BZ29 2069 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 A0A096LNJ9 63 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 HEATR9A2RTY3 570 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 FAM47DPA6NHR8 397 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF716A6NP11 495 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 SPECC1L-ADORA2AF8WAN1 911 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZBTB5O15062 677 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 MRPS12O15235 138 aaKnown RBP1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 B4GALT5O43286 388 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 EEDO75530 441 aaKnown RBP1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 C6orf47O95873 294 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGLV2-23P01705 113 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 OR4Q2P0C623 313 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF735P0CB33 412 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF43P17038 809 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF30P17039 623 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 CSRP1P21291 193 aaKnown RBP1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 CHMLP26374 656 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 LONP1P36776 959 aaKnown RBP1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 OR1G1P47890 313 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 UBE2AP49459 152 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 GPX6P59796 221 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 RPS21P63220 83 aaKnown RBP1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 PAX5Q02548 391 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 ENPEPQ07075 957 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 GGTLC2Q14390 218 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 PRPSAP1Q14558 356 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 TTLL9Q3SXZ7 439 aa1.7□□□□□ -2.14
HMGB1P31-201ENST00000437242 PCP2Q8IVA1 136 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms