RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 STK38Q15208 465 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 POU2AF1Q16633 256 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 TMEM183BQ1AE95 376 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CT45A1Q5HYN5 189 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 KPRPQ5T749 579 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 HES5Q5TA89 166 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 METTL21CQ5VZV1 264 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 FBXW12Q6X9E4 464 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 ABHD12BQ7Z5M8 362 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 RBM45Q8IUH3 476 aaKnown RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CDKL3Q8IVW4 592 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 TMEM183AQ8IXX5 376 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 FAM71E2Q8N5Q1 922 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 DRAXINQ8NBI3 349 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CHST4Q8NCG5 386 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 NOXO1Q8NFA2 376 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 NPBQ8NG41 125 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 OR8K3Q8NH51 312 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CT45A3Q8NHU0 189 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 RBMXL1Q96E39 390 aaKnown RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 RNF185Q96GF1 192 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 CPB2Q96IY4 423 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 ATP6V1G3Q96LB4 118 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 UBE2E2Q96LR5 201 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 NAPGQ99747 312 aaPredicted RBP1.78□□□□□ -2.12
PTPN4-205ENST00000433888 STMN3Q9NZ72 180 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 SHPKQ9UHJ6 478 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 ENPP5Q9UJA9 477 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 ZNF225Q9UK10 706 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 TP53TG5Q9Y2B4 290 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 V9GYY9 64 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
PTPN4-205ENST00000433888 PCM1Q15154 2024 aa1.78□□□□□ -2.13
PTPN4-205ENST00000433888 TRAV8-7A0A075B6U6 113 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 IGKV1-8A0A0C4DH67 115 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 GOLGA8QA0A0J9YX86 632 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 A0A0J9YYE9 177 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF879B4DU55 563 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 ANKRD65E5RJM6 399 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 K7ERQ8 282 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RNF113AO15541 343 aaKnown RBP1.77□□□□□ -2.13
PTPN4-205ENST00000433888 NEMFO60524 1076 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 TRBC1P01850 177 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 BGLAPP02818 100 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 IGHV4-34P06331 123 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RETP07949 1114 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 CD3GP09693 182 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 OR8U9P0C7N5 309 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RD3LP0DJH9 198 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 LIPCP11150 499 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 TNFSF9P41273 254 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 GALR1P47211 349 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 NMUP48645 174 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 CYB561P49447 251 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 LHX2P50458 406 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 CLDN18P56856 261 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 MADCAM1Q13477 382 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 PRPSAP1Q14558 356 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 TNXAQ16473 311 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 C5orf64Q2M2E5 130 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 TPRG1LQ5T0D9 272 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 CASC10Q5T4H9 136 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 OR2T5Q6IEZ7 315 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 TEX43Q6ZNM6 134 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 COX15Q7KZN9 410 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 PID1Q7Z2X4 250 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 OR2W3Q7Z3T1 314 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 LINC01551Q86U37 167 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RAB43Q86YS6 212 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 NKAIN4Q8IVV8 208 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 LRRC8AQ8IWT6 810 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 SYCE1Q8N0S2 351 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 METTL13Q8N6R0 699 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF645Q8N7E2 425 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 OR2T29Q8NH02 315 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 OR8U1Q8NH10 309 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RXFP2Q8WXD0 754 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 NEURL3Q96EH8 262 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 C19orf60Q96EN9 201 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 MSANTD3Q96H12 275 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 ZNF75AQ96N20 296 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 WFIKKN1Q96NZ8 548 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 KRTAP4-1Q9BYQ7 146 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RAB1BQ9H0U4 201 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 KIR3DX1Q9H7L2 352 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 RGS18Q9NS28 235 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 CLEC2DQ9UHP7 191 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 SAR1BQ9Y6B6 198 aa1.77□□□□□ -2.13
PTPN4-205ENST00000433888 BRCA1P38398 1863 aaKnown RBP1.77□□□□□ -2.13
PTPN4-205ENST00000433888 TET2Q6N021 2002 aaPredicted RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 NDUFC2-KCTD14E9PQ53 114 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SMLR1H3BR10 107 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 DFFAO00273 331 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 PEX7O00628 323 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SLC31A2O15432 143 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 ERI3O43414 337 aaKnown RBP1.76□□□□□ -2.13
PTPN4-205ENST00000433888 AQP8O94778 261 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 SMC2O95347 1197 aa1.76□□□□□ -2.13
PTPN4-205ENST00000433888 IVLP07476 585 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms