RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 TMEM218A2RU14 115 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 AQP8O94778 261 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 SNRNP70P08621 437 aaKnown RBP11.12□□□□□ -0.63
CDH3-202ENST00000429102 GABRR1P24046 479 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 PPT1P50897 306 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 CSNK2A1P68400 391 aaPredicted RBP11.12□□□□□ -0.63
CDH3-202ENST00000429102 TOMM20Q15388 145 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 PRAMEF20Q5VT98 475 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 CATSPERDQ86XM0 798 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 C20orf196Q8IYI0 205 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 ZNF283Q8N7M2 679 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 CSNK2A3Q8NEV1 391 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 STOML3Q8TAV4 291 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 SLAMF6Q96DU3 332 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 GPX7Q96SL4 187 aaPredicted RBP11.12□□□□□ -0.63
CDH3-202ENST00000429102 PRRT1Q99946 306 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 CHRDQ9H2X0 955 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 KLHL13Q9P2N7 655 aa11.12□□□□□ -0.63
CDH3-202ENST00000429102 OR6C65A6NJZ3 312 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 SULT2B1O00204 365 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 TNFRSF10CO14798 259 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 LRP3O75074 770 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 MED6O75586 246 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 ADCYAP1P18509 176 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 SNU13P55769 128 aaKnown RBP11.11□□□□□ -0.63
CDH3-202ENST00000429102 HYAL1Q12794 435 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 SMCO1Q147U7 214 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 ELAVL1Q15717 326 aaKnown RBP11.11□□□□□ -0.63
CDH3-202ENST00000429102 RTL10Q7L3V2 364 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 PIGTQ969N2 578 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 ARHGAP5-AS1Q96IT6 56 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
CDH3-202ENST00000429102 R4GMQ9 66 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 IGLV1-36A0A0B4J1U3 117 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 C5orf63A6NC05 138 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 PLPP3O14495 311 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 ZNF217O75362 1048 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 FXYD4P59646 89 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 ZNF616Q08AN1 781 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 RAB32Q13637 225 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.11□□□□□ -0.63
CDH3-202ENST00000429102 PNLDC1Q8NA58 520 aaKnown RBP11.11□□□□□ -0.63
CDH3-202ENST00000429102 OR5AP2Q8NGF4 316 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 TCTN2Q96GX1 697 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 LRFN5Q96NI6 719 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 CNTNAP3BQ96NU0 1288 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 A0A0A6YYH2 397 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 A6NJ64 397 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 A8MVM7 634 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 FOLR1P15328 257 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 RAB6AP20340 208 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 SGCBQ16585 318 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 MICBQ29980 383 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 DRAM2Q6UX65 266 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 LINC00518Q8N0U6 118 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 PAQR4Q8N4S7 273 aaPredicted RBP11.11□□□□□ -0.63
CDH3-202ENST00000429102 ZSCAN4Q8NAM6 433 aaPredicted RBP11.11□□□□□ -0.63
CDH3-202ENST00000429102 OR51T1Q8NGJ9 327 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 CD300LFQ8TDQ1 290 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 RAB3CQ96E17 227 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 SLC46A1Q96NT5 459 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 MFRPQ9BY79 579 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 EHFQ9NZC4 300 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 GLS2Q9UI32 602 aa11.11□□□□□ -0.63
CDH3-202ENST00000429102 IGHV3-15A0A0B4J1V0 119 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 ZNF98A6NK75 572 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 H0YIZ8 118 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 CLPSP04118 112 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 SPP1P10451 314 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 NAT2P11245 290 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 ZBTB25P24278 435 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 RPL7L1Q6DKI1 246 aaKnown RBP11.1□□□□□ -0.63
CDH3-202ENST00000429102 OR5B2Q96R09 309 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 HDHD3Q9BSH5 251 aaPredicted RBP11.1□□□□□ -0.63
CDH3-202ENST00000429102 PBOV1Q9GZY1 135 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 GPR84Q9NQS5 396 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 FAM86C1Q9NVL1 165 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 MRPS28Q9Y2Q9 187 aaKnown RBP11.1□□□□□ -0.63
CDH3-202ENST00000429102 COL6A3P12111 3177 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 TRAV20A0A0B4J274 112 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 TUBAL3A6NHL2 446 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 OR5K4A6NMS3 321 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 BET1O15155 118 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 EFSO43281 561 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 OR2F2O95006 317 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 NXPH3O95157 252 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 PRH1P02810 166 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 CSRP1P21291 193 aaKnown RBP11.1□□□□□ -0.63
CDH3-202ENST00000429102 OPRM1P35372 400 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 SNRPEP62304 92 aaKnown RBP11.1□□□□□ -0.63
CDH3-202ENST00000429102 OR2F1Q13607 317 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 IGSF11Q5DX21 431 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 BAP18Q8IXM2 172 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 SVBPQ8N300 66 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 OR1M1Q8NGA1 313 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 MRGPRFQ96AM1 343 aa11.1□□□□□ -0.63
CDH3-202ENST00000429102 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms