RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SRSF10O75494 262 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 HTR3BO95264 441 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 TTRP02766 147 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 TPT1P13693 172 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PVALBP20472 110 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 FBLP22087 321 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 BIDP55957 195 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 FBXW4P57775 412 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 HSF1Q00613 529 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ARFRP1Q13795 201 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 CARD17Q5XLA6 110 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF585AQ6P3V2 769 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 GLIPR1L1Q6UWM5 242 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 BAP18Q8IXM2 172 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SVBPQ8N300 66 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZDHHC22Q8N966 263 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 BHLHE23Q8NDY6 225 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM104Q8NE00 496 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 OR10Z1Q8NGY1 313 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PIK3IP1Q96FE7 263 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 FAM71F1Q96KD3 344 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF285Q96NJ3 590 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 GPER1Q99527 375 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 METTL8Q9H825 291 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 FN3KRPQ9HA64 309 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 CLEC1BQ9P126 229 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF629Q9UEG4 869 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SLC5A6Q9Y289 635 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 A6NIZ1 184 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SOCS1O15524 211 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SSX5O60225 188 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 DUS4LO95620 317 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ACTL6AO96019 429 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 IL2RAP01589 272 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ISG15P05161 165 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 GIMD1P0DJR0 217 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 MYF5P13349 255 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 GLULP15104 373 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 RAB6AP20340 208 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PNLIPRP2P54317 469 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 OR1D5P58170 312 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 RAP1BP61224 184 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 RAP1AP62834 184 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 FLI1Q01543 452 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SCRN3Q0VDG4 424 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SGCAQ16586 387 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 H3F3CQ6NXT2 135 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 H1FNTQ75WM6 255 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ASB10Q8WXI3 467 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 RRNAD1Q96FB5 475 aaKnown RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZDHHC12Q96GR4 267 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ST6GALNAC5Q9BVH7 336 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF304Q9HCX3 659 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 LHX6Q9UPM6 363 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 PRELID3BQ9Y3B1 194 aa6.7□□□□□ -1.34
SMARCC1-202ENST00000425518 SDCBPO00560 298 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 AGPAT2O15120 278 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 BCKDHBP21953 392 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 HSD11B1P28845 292 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 CDAP32320 146 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 FASLGP48023 281 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 SRSF4Q08170 494 aaKnown RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 PHF19Q5T6S3 580 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 GALNTL5Q7Z4T8 443 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 ABHD12BQ7Z5M8 362 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 GKN2Q86XP6 184 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 OR1N1Q8NGS0 311 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 OR1L3Q8NH93 324 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 TERB2Q8NHR7 220 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 TMEM234Q8WY98 164 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 MAFIPQ8WZ33 124 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 ARL11Q969Q4 196 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 RAB3CQ96E17 227 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 CNTNAP3BQ96NU0 1288 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 RNF126Q9BV68 326 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 TLNRD1Q9H1K6 362 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 SLC2A8Q9NY64 477 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF107Q9UII5 783 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 FAM96BQ9Y3D0 163 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 IGKV3D-11A0A0A0MRZ8 115 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 LOC390937A0A1W2PQ73 354 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 A0A1W2PQD3 144 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 MSGN1A6NI15 193 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 H0YIZ8 118 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 ZNF354AO60765 605 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 FARS2O95363 451 aaKnown RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 HCKP08631 526 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 ADCYAP1P18509 176 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 DAP3P51398 398 aaKnown RBP6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 CCR5P51681 352 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 STK11Q15831 433 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 MICBQ29980 383 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 SPAG16Q8N0X2 631 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 OR5T2Q8NGG2 359 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 OR5D18Q8NGL1 313 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 NPRL2Q8WTW4 380 aa6.69□□□□□ -1.34
SMARCC1-202ENST00000425518 RNF133Q8WVZ7 376 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms