RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 BHLHE23Q8NDY6 225 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 OR4M2Q8NGB6 313 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 SPTSSAQ969W0 71 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 APOBEC3DQ96AK3 386 aaPredicted RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 SLAMF6Q96DU3 332 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 ZMYND19Q96E35 227 aaPredicted RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 NRBF2Q96F24 287 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 C1orf147Q96MC9 270 aaPredicted RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 COG8Q96MW5 612 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 SIGLEC11Q96RL6 698 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 INTS14Q96SY0 518 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 NMNAT2Q9BZQ4 307 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 CYSLTR2Q9NS75 346 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 ATPIF1Q9UII2 106 aa10.92□□□□□ -0.66
VRK3-203ENST00000424804 PURGQ9UJV8 347 aaKnown RBP10.92□□□□□ -0.66
VRK3-203ENST00000424804 DOCK11Q5JSL3 2073 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 PPIAL4EA0A075B759 164 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 PPIAL4CA0A0B4J2A2 164 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 F5H0A9 414 aaPredicted RBP10.91□□□□□ -0.66
VRK3-203ENST00000424804 PPIAL4DF5H284 164 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 TRIM77I1YAP6 450 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 M0R135 149 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 GLCEO94923 617 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 ACSM4P0C7M7 580 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 PPIAL4FP0DN26 164 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 HSD11B1P28845 292 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 GSTT1P30711 240 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 PRKXP51817 358 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 BLVRAP53004 296 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 CRISP1P54107 249 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 SEC61A1P61619 476 aaKnown RBP10.91□□□□□ -0.66
VRK3-203ENST00000424804 TNFAIP6P98066 277 aaPredicted RBP10.91□□□□□ -0.66
VRK3-203ENST00000424804 CDK5Q00535 292 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 ECH1Q13011 328 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 MALLQ13021 153 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 KPNB1Q14974 876 aaKnown RBP10.91□□□□□ -0.66
VRK3-203ENST00000424804 ZMAT1Q5H9K5 638 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 OR2T2Q6IF00 324 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 ZNF771Q7L3S4 317 aaPredicted RBP10.91□□□□□ -0.66
VRK3-203ENST00000424804 DPY19L4Q7Z388 723 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 ZNF283Q8N7M2 679 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 OR2Z1Q8NG97 314 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 PTP4A1Q93096 173 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 ZNF799Q96GE5 643 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 EGLN1Q9GZT9 426 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 C7orf69Q9H7B7 122 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 ZDHHC8Q9ULC8 765 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 NPTNQ9Y639 398 aa10.91□□□□□ -0.66
VRK3-203ENST00000424804 SPRY1O43609 319 aaPredicted RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 SELENOFO60613 162 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 SLC2A1P11166 492 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 KITLGP21583 273 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 GATA3P23771 443 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 LIPAP38571 399 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 NAA10P41227 235 aaPredicted RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 UBA52P62987 128 aaKnown RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 ACTG1P63261 375 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 PAX2Q02962 417 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 SCGB2A2Q13296 93 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 AWAT1Q58HT5 328 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 FAHD1Q6P587 224 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 LRRC28Q86X40 367 aaPredicted RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 BBS1Q8NFJ9 593 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 OR10S1Q8NGN2 331 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 NANPQ8TBE9 248 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 DNAJC9Q8WXX5 260 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 C22orf15Q8WYQ4 148 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 GCDHQ92947 438 aaPredicted RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 TIMD4Q96H15 378 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 GAL3ST1Q99999 423 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 SUCNR1Q9BXA5 334 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 PATZ1Q9HBE1 687 aaKnown RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 SLC25A19Q9HC21 320 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 PNRC2Q9NPJ4 139 aaKnown RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 DNAJC27Q9NZQ0 273 aa10.9□□□□□ -0.66
VRK3-203ENST00000424804 CGGBP1Q9UFW8 167 aaPredicted RBP10.9□□□□□ -0.66
VRK3-203ENST00000424804 IGHV3-64DA0A0J9YX35 117 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 ISPDA4D126 451 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 ZNF878C9JN71 531 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 M0R129 80 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 TBX1O43435 398 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 ANXA2P07355 339 aaKnown RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 MRPL3P09001 348 aaKnown RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 RAC2P15153 192 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 ZNF12P17014 697 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 TUBG1P23258 451 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 TNFSF4P23510 183 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 APOFQ13790 326 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 PTGES3Q15185 160 aaKnown RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 ZMYND11Q15326 602 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 RSPO1Q2MKA7 263 aaPredicted RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 LINC01590Q5TEZ4 76 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 MRPL21Q7Z2W9 205 aaKnown RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 BCL6BQ8N143 479 aaPredicted RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 TEX29Q8N6K0 151 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 OR10AD1Q8NGE0 317 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 OR2AE1Q8NHA4 323 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 THEM6Q8WUY1 208 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms