RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SH2D7A6NKC9 451 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 VGLL3A8MV65 326 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 TMEM233B4DJY2 109 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 ACOT8O14734 319 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 FCN3O75636 299 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 KRT75O95678 551 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 COX5BP10606 129 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 MUC1P15941 1255 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 AZGP1P25311 298 aaKnown RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 HTR2AP28223 471 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 RGS8P57771 180 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 DSTNP60981 165 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 SLC35B1P78383 322 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 ELF3P78545 371 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 MZT1Q08AG7 82 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 LRRC74AQ0VAA2 488 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 PMS2P11Q13670 270 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 DEFB136Q30KP8 78 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 C4orf46Q504U0 113 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 NXNQ6DKJ4 435 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 TTC33Q6PID6 262 aaPredicted RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 LCNL1Q6ZST4 164 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 CBLL1Q75N03 491 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 MRPL21Q7Z2W9 205 aaKnown RBP5.02□□□□□ -1.61
SDCBP-203ENST00000424270 LCA5Q86VQ0 697 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 SGPP2Q8IWX5 399 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 RIMKLAQ8IXN7 391 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 MKXQ8IYA7 352 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 PCYOX1LQ8NBM8 494 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 OR5T2Q8NGG2 359 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 BBS10Q8TAM1 723 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 FBXO25Q8TCJ0 367 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 LRRC29Q8WV35 223 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 STMN2Q93045 179 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 ST6GALNAC6Q969X2 333 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 RAX2Q96IS3 184 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 SLC22A4Q9H015 551 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 SMURF2Q9HAU4 748 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 EMC7Q9NPA0 242 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 SNTG1Q9NSN8 517 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 ZFP57Q9NU63 452 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 C14orf119Q9NWQ9 140 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 TAS2R5Q9NYW4 299 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 SCOCQ9UIL1 159 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 POLR1DQ9Y2S0 133 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 PPP2R2CQ9Y2T4 447 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 HILPDAQ9Y5L2 63 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 LYVE1Q9Y5Y7 322 aa5.02□□□□□ -1.61
SDCBP-203ENST00000424270 A0A0G2JPF8 293 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 TRIM64CA6NLI5 447 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 CENPBD1B2RD01 187 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 HNRNPCL2B2RXH8 293 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 HNRNPCL3B7ZW38 293 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 HNRNPCL1O60812 293 aaKnown RBP5.01□□□□□ -1.61
SDCBP-203ENST00000424270 SAP30O75446 220 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 ANP32DO95626 131 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 C1QCP02747 245 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 HNRNPCL4P0DMR1 293 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 SELLP14151 372 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 GP9P14770 177 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 S100A3P33764 101 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 GABRA2P47869 451 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 OR3A4PP47883 348 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 INSL3P51460 131 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 CDH12P55289 794 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 CLDN8P56748 225 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 ERVFRD-1P60508 538 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 OR1Q1Q15612 314 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 HIST3H3Q16695 136 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 PCK2Q16822 640 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 UGT3A2Q3SY77 523 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 C6orf136Q5SQH8 315 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 TEX36Q5VZQ5 186 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 HCP5Q6MZN7 132 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 ZNF782Q6ZMW2 699 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-203ENST00000424270 PGAP1Q75T13 922 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 GCSAMQ8N6F7 178 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 GOLGA6L1Q8N7Z2 621 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 LSMEM1Q8N8F7 131 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 PLPP7Q8NBV4 271 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 TMEM185AQ8NFB2 350 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 OR8J2Q8NGG1 315 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 OR8S1Q8NH09 359 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 OR1F12Q8NHA8 337 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 NDNFQ8TB73 568 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 SLC38A5Q8WUX1 472 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 ASB10Q8WXI3 467 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 SLC35B4Q969S0 331 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 SLCO4A1Q96BD0 722 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 TMEM19Q96HH6 336 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 MED30Q96HR3 178 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 TMEM43Q9BTV4 400 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 RAB17Q9H0T7 212 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 RERGLQ9H628 205 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 PPP1R3EQ9H7J1 279 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 ELL3Q9HB65 397 aaPredicted RBP5.01□□□□□ -1.61
SDCBP-203ENST00000424270 INIPQ9NRY2 104 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 NINJ2Q9NZG7 142 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 DCDC2Q9UHG0 476 aa5.01□□□□□ -1.61
SDCBP-203ENST00000424270 ZNF229Q9UJW7 825 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms