RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 MED20Q9H944 212 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 CYB5R1Q9UHQ9 305 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 PPP1R3CQ9UQK1 317 aa12.79□□□□□ -0.36
USB1-202ENST00000423271 IGHV3-64DA0A0J9YX35 117 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 FAM183AA6NL82 134 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 F5H5K5 113 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 MLNRO43193 412 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 HMGN1P05114 100 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 ALPLP05186 524 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 SPI1P17947 270 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 EPHA1P21709 976 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 ANOS1P23352 680 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 POLR2IP36954 125 aaKnown RBP12.78□□□□□ -0.36
USB1-202ENST00000423271 SLC25A1P53007 311 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 SEC61A1P61619 476 aaKnown RBP12.78□□□□□ -0.36
USB1-202ENST00000423271 BTG1P62324 171 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 COLCA1Q6ZS62 124 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 C1QL2Q7Z5L3 287 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 NAA40Q86UY6 237 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 OR8G5Q8NG78 346 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 OR10S1Q8NGN2 331 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 OR2AJ1Q8NGZ0 328 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 ZNF420Q8TAQ5 688 aaPredicted RBP12.78□□□□□ -0.36
USB1-202ENST00000423271 ST7LQ8TDW4 575 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 OTULINQ96BN8 352 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 MAP6Q96JE9 813 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 MEGF10Q96KG7 1140 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 ATF6BQ99941 703 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 CDADC1Q9BWV3 514 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 C1QTNF5Q9BXJ0 243 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 RIBC2Q9H4K1 309 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 TVP23BQ9NYZ1 205 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 USE1Q9NZ43 259 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
USB1-202ENST00000423271 TVP23AA6NH52 213 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 ZAR1LA6NP61 321 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 IQCF6A8MYZ5 107 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 F5H5P2 479 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 TMEM178BH3BS89 294 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 J3QLI3 93 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 M0R129 80 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 SELEP16581 610 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 ALDH3A2P51648 485 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 RCN1Q15293 331 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 SNAPC1Q16533 368 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 TMEM155Q4W5P6 130 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 SLX4IPQ5VYV7 408 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 LRRC28Q86X40 367 aaPredicted RBP12.77□□□□□ -0.37
USB1-202ENST00000423271 SPICQ8N5J4 248 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 OR13G1Q8NGZ3 307 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 ZNF582Q96NG8 517 aaPredicted RBP12.77□□□□□ -0.37
USB1-202ENST00000423271 SLC29A1Q99808 456 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 SLC30A2Q9BRI3 323 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 GABARAPL3Q9BY60 117 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 C7orf69Q9H7B7 122 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 PATZ1Q9HBE1 687 aaKnown RBP12.77□□□□□ -0.37
USB1-202ENST00000423271 ENOPH1Q9UHY7 261 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 PCDHB10Q9UN67 800 aa12.77□□□□□ -0.37
USB1-202ENST00000423271 PRR23D1E9PI22 279 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 F5H0A9 414 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 FOXH1O75593 365 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 ZNF205O95201 554 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 CYB5R3P00387 301 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 FSHBP01225 129 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 LCATP04180 440 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 HLA-DPB1P04440 258 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 PRR23D2P0DMB1 279 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 PAICSP22234 425 aaKnown RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 ELF3P78545 371 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 ECH1Q13011 328 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 GK2Q14410 553 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 C12orf73Q69YU5 71 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 PLBD1Q6P4A8 553 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 CPOQ8IVL8 374 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 KLHL36Q8N4N3 616 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 BBS1Q8NFJ9 593 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
USB1-202ENST00000423271 C9orf16Q9BUW7 83 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 TEX12Q9BXU0 123 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 MMP26Q9NRE1 261 aa12.76□□□□□ -0.37
USB1-202ENST00000423271 TENM1Q9UKZ4 2725 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 A0A0A6YYJ9 748 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 C5orf63A6NC05 138 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 TRAPPC2LH3BP13 241 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 M0R135 149 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 PRKYO43930 277 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 ZNF823P16415 610 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 GATA3P23771 443 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 FMO3P31513 532 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
USB1-202ENST00000423271 SRP9P49458 86 aaKnown RBP12.75□□□□□ -0.37
USB1-202ENST00000423271 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 ZIK1Q3SY52 487 aaPredicted RBP12.75□□□□□ -0.37
USB1-202ENST00000423271 LINC01590Q5TEZ4 76 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 ZBTB49Q6ZSB9 765 aa12.75□□□□□ -0.37
USB1-202ENST00000423271 MOGAT3Q86VF5 341 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms