RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ZNF768Q9H5H4 540 aaKnown RBP13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 SUSD2Q9UGT4 822 aa13.51□□□□□ -0.25
SEMA3B-203ENST00000419007 CFAP54Q96N23 3096 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 MPTX1A8MV57 137 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 SIGLEC6O43699 453 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 DUS4LO95620 317 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ACTL6AO96019 429 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ISG15P05161 165 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 TPT1P13693 172 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ABOP16442 354 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 RAB6AP20340 208 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PVALBP20472 110 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 FBLP22087 321 aaKnown RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 FASLGP48023 281 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 BIDP55957 195 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ATG2AQ2TAZ0 1938 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PLEKHN1Q494U1 663 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PABPC1L2AQ5JQF8 200 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 OR5D14Q8NGL3 314 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 OR10Z1Q8NGY1 313 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 C11orf40Q8WZ69 217 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PIK3IP1Q96FE7 263 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF285Q96NJ3 590 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 MESP1Q9BRJ9 268 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PBOV1Q9GZY1 135 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 FN3KRPQ9HA64 309 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 SLC2A8Q9NY64 477 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 CLEC1BQ9P126 229 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PRELID3BQ9Y3B1 194 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 A0A1W2PPC4 97 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 RHPN2P1A8MT19 583 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 HTR3BO95264 441 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 HSF1Q00613 529 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 PHF19Q5T6S3 580 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 TMEM200AQ86VY9 491 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 LDLRAD3Q86YD5 345 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ASB10Q8WXI3 467 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 GPER1Q99527 375 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 GSKIPQ9P0R6 139 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF107Q9UII5 783 aaPredicted RBP13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 SLC5A6Q9Y289 635 aa13.5□□□□□ -0.25
SEMA3B-203ENST00000419007 IGKV3D-11A0A0A0MRZ8 115 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 A0A1W2PP11 408 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 LOC390937A0A1W2PQ73 354 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 A6NIZ1 184 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF705EA8MWA4 302 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 IL2RAP01589 272 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 PNLIPRP2P54317 469 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 FBXW4P57775 412 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 RAP1BP61224 184 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 RAP1AP62834 184 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 FLI1Q01543 452 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 H3F3CQ6NXT2 135 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 GLIPR1L1Q6UWM5 242 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 BAP18Q8IXM2 172 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 LINC00518Q8N0U6 118 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 BHLHE23Q8NDY6 225 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 TMEM104Q8NE00 496 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 OIT3Q8WWZ8 545 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 FAM71F1Q96KD3 344 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 SOX7Q9BT81 388 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 HRH4Q9H3N8 390 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF304Q9HCX3 659 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 A0A1W2PQD3 144 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 GIMD1P0DJR0 217 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 HSD11B1P28845 292 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 DAP3P51398 398 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 SRSF4Q08170 494 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 SCRN3Q0VDG4 424 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ARFRP1Q13795 201 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 AKIRIN2Q53H80 203 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 CARD17Q5XLA6 110 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF585AQ6P3V2 769 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 H1FNTQ75WM6 255 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 PTX4Q96A99 478 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 RRNAD1Q96FB5 475 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ZDHHC12Q96GR4 267 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 METTL8Q9H825 291 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF629Q9UEG4 869 aaPredicted RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 COL4A2P08572 1712 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 SOCS1O15524 211 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 SSX5O60225 188 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ZNF217O75362 1048 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 FARS2O95363 451 aaKnown RBP13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 HCKP08631 526 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ADCYAP1P18509 176 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 SGCAQ16586 387 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 GALNTL5Q7Z4T8 443 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 GKN2Q86XP6 184 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 OR5T2Q8NGG2 359 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 OR1N1Q8NGS0 311 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 TMEM234Q8WY98 164 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 ARL11Q969Q4 196 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 TMEM131Q92545 1883 aa13.49□□□□□ -0.25
SEMA3B-203ENST00000419007 MUC3AQ02505 3323 aa13.48□□□□□ -0.25
SEMA3B-203ENST00000419007 GLULP15104 373 aa13.48□□□□□ -0.25
SEMA3B-203ENST00000419007 BCKDHBP21953 392 aa13.48□□□□□ -0.25
SEMA3B-203ENST00000419007 MMP16P51512 607 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms