RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 M1APQ8TC57 530 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 SOCS4Q8WXH5 440 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 CMBLQ96DG6 245 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR8B4Q96RC9 309 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 NDUFAF3Q9BU61 184 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 PBDC1Q9BVG4 233 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ELOVL3Q9HB03 270 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 LUZP4Q9P127 313 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 HIF3AQ9Y2N7 669 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 COLEC10Q9Y6Z7 277 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 K7EPK0 472 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 NRG2O14511 850 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 KAT7O95251 611 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 PNPP00491 289 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 HCKP08631 526 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 CXCL1P09341 107 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF888P0CJ79 500 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 CHATP28329 748 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 GPR18Q14330 331 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC17A1Q14916 467 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ITPRIPL2Q3MIP1 535 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF385CQ66K41 422 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF550Q7Z398 422 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM71E2Q8N5Q1 922 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 LRRC75AQ8NAA5 344 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 BEND2Q8NDZ0 799 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OR13D1Q8NGV5 346 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 OTOSQ8NHW6 89 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 Q8WTZ3 238 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC25A44Q96H78 314 aaPredicted RBP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 ARV1Q9H2C2 271 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB22AQ9UL26 194 aa7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 PUS1Q9Y606 427 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMGXB4-202ENST00000418170 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 OR13C7P0DN81 318 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 FABP4P15090 132 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF708P17019 499 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 GDI1P31150 447 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 FCGR2CP31995 323 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 TMEM33P57088 247 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ID2Q02363 134 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 RPUSD3Q6P087 351 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 LYPD6Q86Y78 171 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ARL6IP6Q8N6S5 226 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CSNK1A1LQ8N752 337 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 PPP1R14AQ96A00 147 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 MVB12AQ96EY5 273 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 METTL9Q9H1A3 318 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 GSKIPQ9P0R6 139 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 PRODH2Q9UF12 536 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 MEMO1Q9Y316 297 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 FBXO7Q9Y3I1 522 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 RHBDD3Q9Y3P4 386 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 A0A087WWC5 75 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 A0A1B0GW64 132 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 H7C1C5 153 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SYT7O43581 403 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 RAMP1O60894 148 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF217O75362 1048 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 TXNDC12O95881 172 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SEC11BP0C7V7 166 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ELNP15502 786 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 IL2RGP31785 369 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CTXN1P60606 82 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 LCN6P62502 163 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 EXOSC7Q15024 291 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 MEP1BQ16820 701 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SOHLH1Q5JUK2 328 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF679Q8IYX0 411 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 LRRC18Q8N456 261 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CHST4Q8NCG5 386 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 OR4D6Q8NGJ1 314 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 OR4K15Q8NH41 348 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 WDR92Q96MX6 357 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 RAB11FIP5Q9BXF6 653 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CREBZFQ9NS37 354 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CBY1Q9Y3M2 126 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SNRPCP09234 159 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CEBPBP17676 345 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SUCLG1P53597 346 aaKnown RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SLC35A1P78382 337 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SPOCK1Q08629 439 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM53BQ14153 422 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CYB5R2Q6BCY4 276 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ZNF761Q86XN6 746 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 OR13C9Q8NGT0 318 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 FAM46BQ96A09 425 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 NOL4LQ96MY1 436 aaPredicted RBP7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 SMDT1Q9H4I9 107 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 C19orf12Q9NSK7 152 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CCL26Q9Y258 94 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 NKX2-2O95096 273 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 MYOGP15173 224 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 GRK6P43250 576 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 CAMLGP49069 296 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 ALG10Q5BKT4 473 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 VN1R4Q7Z5H5 301 aa7.16□□□□□ -1.26
HMGXB4-202ENST00000418170 FOXRED2Q8IWF2 684 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms