RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 FARS2O95363 451 aaKnown RBP10.86□□□□□ -0.67
LINC00339-202ENST00000416769 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 SBK2P0C263 348 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 GABRB1P18505 474 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-202ENST00000416769 PRTN3P24158 256 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 STOMP27105 288 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 CENPAP49450 140 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 SELENOVP59797 346 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 ISL1P61371 349 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 LCN6P62502 163 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 HSF2Q03933 536 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 OCLNQ16625 522 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 MIDNQ504T8 468 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 MEDAGQ5VYS4 303 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 OTPQ5XKR4 325 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 DNM1P34Q6PK57 102 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 DOK3Q7L591 496 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 ZBTB46Q86UZ6 589 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 ENTHD1Q8IYW4 607 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 OR6V1Q8N148 313 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 CYB561A3Q8NBI2 242 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 OR2T4Q8NH00 348 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-202ENST00000416769 RAB1CQ92928 201 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 UBE2FQ969M7 185 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 TIMD4Q96H15 378 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 IL4I1Q96RQ9 567 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 BCL2L14Q9BZR8 327 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 SYT4Q9H2B2 425 aa10.86□□□□□ -0.67
LINC00339-202ENST00000416769 RPRD1BQ9NQG5 326 aaKnown RBP10.86□□□□□ -0.67
LINC00339-202ENST00000416769 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
LINC00339-202ENST00000416769 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 GPR37O15354 613 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 DENRO43583 198 aaKnown RBP10.85□□□□□ -0.67
LINC00339-202ENST00000416769 CLIC3O95833 236 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 GPANK1O95872 356 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 APLNRP35414 380 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 ZNF84P51523 738 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 PSG4Q00888 419 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 TEKQ02763 1124 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 FOXL1Q12952 345 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 ZNF154Q13106 437 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 SLC35D3Q5M8T2 416 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 AADACL4Q5VUY2 407 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 NXNL2Q5VZ03 156 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 PLBD1Q6P4A8 553 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 THAP5Q7Z6K1 395 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 C8orf59Q8N0T1 100 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-202ENST00000416769 Q96MT0 163 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 WNT5BQ9H1J7 359 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 GPR160Q9UJ42 338 aa10.85□□□□□ -0.67
LINC00339-202ENST00000416769 IGLV1-36A0A0B4J1U3 117 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 DCTN6O00399 190 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 PRODHO43272 600 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 ZNF205O95201 554 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 SCG5P05408 212 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 CTLA4P16410 223 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 SPI1P17947 270 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 MYF6P23409 242 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 FPR2P25090 351 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 LAP3P28838 519 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 GUCA1AP43080 201 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-202ENST00000416769 BLVRAP53004 296 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 PPP1CBP62140 327 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 IL5RAQ01344 420 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 PLP2Q04941 152 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 BAMBIQ13145 260 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 TMED1Q13445 227 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 ZMYND11Q15326 602 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 SLC9A3R2Q15599 337 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 SGCAQ16586 387 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 FAM209AQ5JX71 171 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 ZNF774Q6NX45 483 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 Q6ZR03 302 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 FOXL2NBQ6ZUU3 175 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 MEPCEQ7L2J0 689 aaKnown RBP10.84□□□□□ -0.67
LINC00339-202ENST00000416769 GID4Q8IVV7 300 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 TEX29Q8N6K0 151 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 OR1J2Q8NGS2 313 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 FBLIM1Q8WUP2 373 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 TEAD3Q99594 435 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 HCAR1Q9BXC0 346 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 ANKRD60Q9BZ19 345 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 OR51V1Q9H2C8 321 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 Q9H521 79 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 MED20Q9H944 212 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 CLN6Q9NWW5 311 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 NUP50Q9UKX7 468 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 COA3Q9Y2R0 106 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-202ENST00000416769 LRRC42Q9Y546 428 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 NPTNQ9Y639 398 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 AUP1Q9Y679 476 aa10.84□□□□□ -0.67
LINC00339-202ENST00000416769 DOCK11Q5JSL3 2073 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms