RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 RAB7BQ96AH8 199 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 CDC6Q99741 560 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 MESP1Q9BRJ9 268 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 NUDT9Q9BW91 350 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 PARP11Q9NR21 331 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC2A8Q9NY64 477 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 THAP10Q9P2Z0 257 aaPredicted RBP13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 HEATR5AQ86XA9 2040 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
NCKIPSD-204ENST00000416649 C1QL1O75973 258 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 GNB3P16520 340 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 DNASE1L1P49184 302 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 CCR4P51679 360 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 CDRT4Q8N9R6 151 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 RNF128Q8TEB7 428 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC25A36Q96CQ1 311 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 LRFN5Q96NI6 719 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR5B2Q96R09 309 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 CRLF2Q9HC73 371 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 GDF2Q9UK05 429 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 PPP1R2P9O14990 202 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 BRINP1O60477 761 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 QDPRP09417 244 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 NR2C1P13056 603 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 GRK6P43250 576 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC6A9P48067 706 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 GALNTL5Q7Z4T8 443 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 CDC20BQ86Y33 519 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF587Q96SQ5 575 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 SLC17A5Q9NRA2 495 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 ARPC3O15145 178 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 PNPP00491 289 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 LSM6P62312 80 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 GPR18Q14330 331 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 CEBPEQ15744 281 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF550Q7Z398 422 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 RCBTB1Q8NDN9 531 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR2L3Q8NG85 312 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 AQP10Q96PS8 301 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 DNAJB12Q9NXW2 375 aaKnown RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 C19orf53Q9UNZ5 99 aaPredicted RBP13.16□□□□□ -0.3
NCKIPSD-204ENST00000416649 H0Y8X5 98 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 PHOX2AO14813 284 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 ALOX5APP20292 161 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 TLX1P31314 330 aaPredicted RBP13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 CAMLGP49069 296 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 AGBL4Q5VU57 503 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 CLEC18BQ6UXF7 455 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 MDGA2Q7Z553 956 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 MFSD8Q8NHS3 518 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 TCTN2Q96GX1 697 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 RBM18Q96H35 190 aaKnown RBP13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 TCEAL2Q9H3H9 227 aaPredicted RBP13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 GRHPRQ9UBQ7 328 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 FBXL17Q9UF56 701 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 MED12Q93074 2177 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 SCGB1D2O95969 90 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 PKIAP61925 76 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 C4orf17Q53FE4 359 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 KHDC3LQ587J8 217 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 ALG10Q5BKT4 473 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 HEPN1Q6WQI6 88 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR52E1Q8NGJ3 308 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 OR14K1Q8NGZ2 314 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 KIAA1549LQ6ZVL6 1849 aa13.15□□□□□ -0.3
NCKIPSD-204ENST00000416649 K7EQS6 105 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 SOD3P08294 240 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 SPARCP09486 303 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 CT62P0C5K7 136 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 SNCAP37840 140 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 CLDN6P56747 220 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 NKX6-1P78426 367 aaPredicted RBP13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 CDK3Q00526 305 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 DMWDQ09019 674 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR8G1Q15617 311 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 ZNF610Q8N9Z0 462 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 S100A13Q99584 98 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 SOX7Q9BT81 388 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 CNTNAP3Q9BZ76 1288 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 UCK1Q9HA47 277 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 DUSP22Q9NRW4 184 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 URB1O60287 2271 aaKnown RBP13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 FCGR2CP31995 323 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 RUNX2Q13950 521 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 TMEM128Q5BJH2 165 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 POMZP3Q6PJE2 187 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 MARCH3Q86UD3 253 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 OR4D6Q8NGJ1 314 aa13.14□□□□□ -0.31
NCKIPSD-204ENST00000416649 MALSU1Q96EH3 234 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms