RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 H3BSH0 61 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 PIN1P1O15428 100 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 GNALP38405 381 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 TIMM23BQ5SRD1 257 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 FAM27D1Q5T7N8 215 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 STAC2Q6ZMT1 411 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 PGAP1Q75T13 922 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 FAM169BQ8N8A8 192 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 SLC30A7Q8NEW0 376 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 OR51A4Q8NGJ6 313 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 OR10AC1Q8NH08 325 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 SGK3Q96BR1 496 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 FGGYQ96C11 551 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 KCTD12Q96CX2 325 aaKnown RBP12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 LRRC46Q96FV0 321 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 C6orf62Q9GZU0 229 aaPredicted RBP12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 NXF2Q9GZY0 626 aaKnown RBP12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 PPIL3Q9H2H8 161 aaKnown RBP12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 PLEKHA1Q9HB21 404 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 NEK6Q9HC98 313 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
HMGA1P1-201ENST00000415560 INTS1Q8N201 2190 aaKnown RBP12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 LOC100509620A0A075B734 347 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 LOC390937A0A1W2PQ73 354 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 ANXA2P2A6NMY6 339 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 NOTOA8MTQ0 251 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 J3QW42 95 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 DHRS3O75911 302 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 FSTP19883 344 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 MAGEB1P43366 347 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 MAP2K3P46734 347 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 PPP3R1P63098 170 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 TSC22D1Q15714 1073 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 MOGQ16653 247 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 GLT8D1Q68CQ7 371 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 MTFR2Q6P444 385 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 PARP16Q8N5Y8 322 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 WDR31Q8NA23 367 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 PLPP7Q8NBV4 271 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 S100ZQ8WXG8 99 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 FOXRED1Q96CU9 486 aaPredicted RBP12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 REEP6Q96HR9 211 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 FAM71F1Q96KD3 344 aaPredicted RBP12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 CEP19Q96LK0 163 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 CNTNAP3BQ96NU0 1288 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 MRI1Q9BV20 369 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 CNTNAP3Q9BZ76 1288 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 OR10A4Q9H209 315 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 OPA3Q9H6K4 179 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 ZNF319Q9P2F9 582 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 AK6Q9Y3D8 172 aaKnown RBP12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 V9GY05 133 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 IGF2RP11717 2491 aa12.39□□□□□ -0.43
HMGA1P1-201ENST00000415560 DMXL2Q8TDJ6 3036 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 A0A1B0GUH1 482 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 A0A1W2PR80 420 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ZNF503-AS2A6NEH8 195 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 DHRS7CA6NNS2 312 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 C16orf97H3BN30 126 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 MAGEB3O15480 346 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 RGS5O15539 181 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 IGLV3-1P01715 115 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 MAS1P04201 325 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ERCC1P07992 297 aaPredicted RBP12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ZNF14P17017 642 aaPredicted RBP12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 RIPPLY1Q0D2K3 151 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 DYNC1I2Q13409 638 aaKnown RBP12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 IDNKQ5T6J7 187 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 C1orf174Q8IYL3 243 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 SEMA6DQ8NFY4 1073 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 OR6Q1Q8NGQ2 317 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 OR14K1Q8NGZ2 314 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 TBC1D15Q8TC07 691 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ZNF75AQ96N20 296 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ZCCHC4Q9H5U6 513 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 NOX3Q9HBY0 568 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 TBCCD1Q9NVR7 557 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 JKAMPQ9P055 326 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ABRACLQ9P1F3 81 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 PLEKHB1Q9UF11 243 aaPredicted RBP12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 ADAM30Q9UKF2 790 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 V9GYS6 101 aa12.38□□□□□ -0.43
HMGA1P1-201ENST00000415560 CACNA1GO43497 2377 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 IGKV3-15P01624 115 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 RAB3AP20336 220 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 TUBG1P23258 451 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 THBS4P35443 961 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 DDOSTP39656 456 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 IDH3GP51553 393 aaPredicted RBP12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 BMXP51813 675 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 SNAI3Q3KNW1 292 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 SLC25A35Q3KQZ1 300 aa12.37□□□□□ -0.43
HMGA1P1-201ENST00000415560 C3orf36Q3SXR2 165 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms