RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 GATAD2BQ8WXI9 593 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 UPB1Q9UBR1 384 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF222Q9UK12 451 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 EXOSC1Q9Y3B2 195 aaKnown RBP13.62□□□□□ -0.23
SHMT2-202ENST00000414700 LHFPL6Q9Y693 200 aa13.62□□□□□ -0.23
SHMT2-202ENST00000414700 KMT2BQ9UMN6 2715 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-202ENST00000414700 DHFRP00374 187 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 LALBAP00709 142 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 IL2RAP01589 272 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 HRGP04196 525 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 TMIGD3P0DMS9 266 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF823P16415 610 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ALOX5APP20292 161 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 SLC6A1P30531 599 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 TIMP3P35625 211 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 BLVRAP53004 296 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 PLA1AQ53H76 456 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 MZT2AQ6P582 158 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 FOXL2NBQ6ZUU3 175 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ST6GALNAC3Q8NDV1 305 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 OR11H7Q8NGC8 314 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 STARD4Q96DR4 205 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 BBC3Q96PG8 261 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-202ENST00000414700 FOXB1Q99853 325 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ATF6BQ99941 703 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 WACQ9BTA9 647 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF416Q9BWM5 594 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 NELFAQ9H3P2 528 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 TMEM38BQ9NVV0 291 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 LAMP5Q9UJQ1 280 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 FGF9P31371 208 aaPredicted RBP13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF84P51523 738 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 OR12D2P58182 307 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 B2MP61769 119 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 RBPJQ06330 500 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 MRPL49Q13405 166 aaKnown RBP13.61□□□□□ -0.23
SHMT2-202ENST00000414700 GPR176Q14439 515 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 PCK2Q16822 640 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 TP53I3Q53FA7 332 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 FBXW9Q5XUX1 488 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 CD276Q5ZPR3 534 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 OR11H4Q8NGC9 324 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 THEM6Q8WUY1 208 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ISYNA1Q9NPH2 558 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 SLCO1C1Q9NYB5 712 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 ASH2LQ9UBL3 628 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 CYB5R1Q9UHQ9 305 aa13.61□□□□□ -0.23
SHMT2-202ENST00000414700 CHD6Q8TD26 2715 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 TMEM129A0AVI4 362 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 H3BUI4 141 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 CASKO14936 926 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 ITGA5P08648 1049 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 CEACAM8P31997 349 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-202ENST00000414700 ACTC1P68032 377 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 ACTA1P68133 377 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 MRPS34P82930 218 aaKnown RBP13.6□□□□□ -0.23
SHMT2-202ENST00000414700 TPBGQ13641 420 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 ENDOGQ14249 297 aaKnown RBP13.6□□□□□ -0.23
SHMT2-202ENST00000414700 BCL2L15Q5TBC7 163 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 DCXRQ7Z4W1 244 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 OR10H5Q8NGA6 315 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 SPRYD4Q8WW59 207 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-202ENST00000414700 C4orf36Q96KX1 117 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 ABHD6Q9BV23 337 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 GHITMQ9H3K2 345 aa13.6□□□□□ -0.23
SHMT2-202ENST00000414700 SF3B6Q9Y3B4 125 aaKnown RBP13.6□□□□□ -0.23
SHMT2-202ENST00000414700 TRGV8A0A0C4DH27 118 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 A0A0G2JNJ9 132 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 RPL36A-HNRNPH2H7BZ11 118 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 ATXN7O15265 892 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-202ENST00000414700 MPC2O95563 127 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 IL18BPO95998 194 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 CGAP01215 116 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 PATE4P0C8F1 98 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 MSR1P21757 451 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 CAV3P56539 151 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 WNT4P56705 351 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 ARF1P84077 181 aaKnown RBP13.59□□□□□ -0.23
SHMT2-202ENST00000414700 EIF2B1Q14232 305 aaKnown RBP13.59□□□□□ -0.23
SHMT2-202ENST00000414700 KLHL24Q6TFL4 600 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 ZNF322Q6U7Q0 402 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-202ENST00000414700 CFAP77Q6ZQR2 320 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 OR6K3Q8NGY3 331 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 ST7LQ8TDW4 575 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 ST8SIA4Q92187 359 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 UFD1Q92890 307 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 FBXO17Q96EF6 278 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 RADILQ96JH8 1075 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 HDHD2Q9H0R4 259 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 OPN3Q9H1Y3 402 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-202ENST00000414700 INPP5EQ9NRR6 644 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 Q9UFV3 132 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 POLR1DQ9Y2S0 133 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 MAB21L2Q9Y586 359 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 A0A096LPE4 126 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 A0A1B0GVI7 797 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 A0A1W2PPZ6 126 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 hCG_1807616A0A1W2PRN6 198 aa13.59□□□□□ -0.23
SHMT2-202ENST00000414700 OR6C65A6NJZ3 312 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms