RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZNF19P17023 458 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 C21orf33P30042 268 aaPredicted RBP26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 PSMB10P40306 273 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 ZNF92Q03936 586 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 GK2Q14410 553 aaPredicted RBP26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 GFOD2Q3B7J2 385 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 ZNF786Q8N393 782 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 C4orf36Q96KX1 117 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 JAM3Q9BX67 310 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 GTF2A1LQ9UNN4 478 aa26.2■■□□□ 1.78
CSNK1E-206ENST00000413574 IGLV3-9A0A075B6K5 115 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 CDKN1AP38936 164 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 CSNK2BP67870 215 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 MALLQ13021 153 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 ZNF829Q3KNS6 432 aaPredicted RBP26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 FAM220AQ7Z4H9 259 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 STX19Q8N4C7 294 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 OR8B12Q8NGG6 310 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 RORBQ92753 470 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 RNF166Q96A37 237 aaPredicted RBP26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 SGK3Q96BR1 496 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 SIGLEC11Q96RL6 698 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 SCN3BQ9NY72 215 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 TAAR3PQ9P1P4 343 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 R4GMQ9 66 aa26.19■■□□□ 1.78
CSNK1E-206ENST00000413574 A0A1W2PPW3 197 aa26.18■■□□□ 1.78
CSNK1E-206ENST00000413574 ALDH3B1P43353 468 aa26.18■■□□□ 1.78
CSNK1E-206ENST00000413574 MMP16P51512 607 aa26.18■■□□□ 1.78
CSNK1E-206ENST00000413574 FBXW12Q6X9E4 464 aa26.18■■□□□ 1.78
CSNK1E-206ENST00000413574 PBOV1Q9GZY1 135 aa26.18■■□□□ 1.78
CSNK1E-206ENST00000413574 USF3Q68DE3 2245 aa26.18■■□□□ 1.78
CSNK1E-206ENST00000413574 LOC110117498-PIK3R3F6TDL0 507 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 IGHV3-13P01766 116 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 TUBG1P23258 451 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 SNRPD2P62316 118 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 ACTA2P62736 377 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 ACTG2P63267 376 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 ZCCHC24Q8N2G6 241 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 OR52H1Q8NGJ2 320 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 HAVCR1Q96D42 359 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 CACNG6Q9BXT2 260 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 OR10A2Q9H208 303 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 SP140LQ9H930 580 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 G6PC2Q9NQR9 355 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 TUBG2Q9NRH3 451 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 CCDC159P0C7I6 412 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 EVX1P49640 407 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 SELENOVP59797 346 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 TIGD6Q17RP2 521 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 OR2G6Q5TZ20 316 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 OR2T2Q6IF00 324 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 GTF3AQ92664 365 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 PELI1Q96FA3 418 aa26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 EXOSC1Q9Y3B2 195 aaKnown RBP26.17■■□□□ 1.78
CSNK1E-206ENST00000413574 VPS13CQ709C8 3753 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 H3BSA7 217 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 RAC2P15153 192 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 MYL12AP19105 171 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 CRHBPP24387 322 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 PGAP1Q75T13 922 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 CDH24Q86UP0 819 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 OR5AS1Q8N127 324 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 REEP6Q96HR9 211 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 ERVK-18Q9QC07 812 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 PURGQ9UJV8 347 aaKnown RBP26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 OR52A1Q9UKL2 312 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 SLC22A13Q9Y226 551 aa26.16■■□□□ 1.78
CSNK1E-206ENST00000413574 OVOL3O00110 214 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 TACSTD2P09758 323 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 DNASE1P24855 282 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 SLC35A2P78381 396 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 MED21Q13503 144 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 MRPL21Q7Z2W9 205 aaKnown RBP26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 KCTD20Q7Z5Y7 419 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 SOX7Q9BT81 388 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 REPIN1Q9BWE0 567 aaKnown RBP26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 TPRKBQ9Y3C4 175 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 NOTCH2Q04721 2471 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 NAV2Q8IVL1 2488 aa26.15■■□□□ 1.78
CSNK1E-206ENST00000413574 XRCC2O43543 280 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 TIMM8AO60220 97 aaPredicted RBP26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 CDK1P06493 297 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 NAT2P11245 290 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 NKPD1Q17RQ9 610 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 SYS1Q8N2H4 156 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 PRSS35Q8N3Z0 413 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 BHLHE23Q8NDY6 225 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 SPRYD4Q8WW59 207 aaPredicted RBP26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 PIGTQ969N2 578 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 MRPL48Q96GC5 212 aaKnown RBP26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 LYZL4Q96KX0 146 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 NUFIP1Q9UHK0 495 aaKnown RBP26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 SNX5Q9Y5X3 404 aa26.14■■□□□ 1.78
CSNK1E-206ENST00000413574 ACOD1A6NK06 481 aa26.14■■□□□ 1.77
CSNK1E-206ENST00000413574 LILRA1O75019 489 aa26.14■■□□□ 1.77
CSNK1E-206ENST00000413574 TTRP02766 147 aa26.14■■□□□ 1.77
CSNK1E-206ENST00000413574 KITLGP21583 273 aa26.14■■□□□ 1.77
CSNK1E-206ENST00000413574 ODF4Q2M2E3 257 aa26.14■■□□□ 1.77
CSNK1E-206ENST00000413574 RBM48Q5RL73 367 aaKnown RBP26.14■■□□□ 1.77
CSNK1E-206ENST00000413574 BCL2L15Q5TBC7 163 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms