RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 AK9Q5TCS8 1911 aa3.11□□□□□ -1.91
HMGB3P31-201ENST00000413333 IGKV1-8A0A0C4DH67 115 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 IGHV5-10-1A0A0J9YXX1 117 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 SLC16A7O60669 478 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 SEMA3DO95025 777 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 DCNP07585 359 aaKnown RBP3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 CTSLP07711 333 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 PGAM1P18669 254 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 GGT2P36268 569 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 TALDO1P37837 337 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 CCNG1P51959 295 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 SYNJ2BPP57105 145 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 TMED1Q13445 227 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 RBMY1FQ15415 496 aaKnown RBP3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 TFDP3Q5H9I0 405 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 RAB43Q86YS6 212 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 PGAM4Q8N0Y7 254 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 CSGALNACT2Q8N6G5 542 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 WDR31Q8NA23 367 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 ASZ1Q8WWH4 475 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 HAUS1Q96CS2 278 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 PDXPQ96GD0 296 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 RNF170Q96K19 258 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 HSD17B10Q99714 261 aaKnown RBP3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 REEP1Q9H902 201 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 C12orf10Q9HB07 376 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 FBXO8Q9NRD0 319 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 AGPAT3Q9NRZ7 376 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 HYOU1Q9Y4L1 999 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 PALLDQ8WX93 1383 aa3.1□□□□□ -1.91
HMGB3P31-201ENST00000413333 IGLV4-69A0A075B6H9 119 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 TRAV19A0A0A6YYK7 116 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 IGHV1-69DA0A0B4J2H0 117 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 RP2O75695 350 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 PTTG1O95997 202 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 GFAPP14136 432 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 MYCNOSP40205 109 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 MECOMQ03112 1051 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 CYP24A1Q07973 514 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 FAM78AQ5JUQ0 283 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 OR2T5Q6IEZ7 315 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 TIFABQ6ZNK6 161 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 SNX20Q7Z614 316 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 RIMKLAQ8IXN7 391 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 TRIML2Q8N7C3 387 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 CYB561D1Q8N8Q1 229 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 OR2T29Q8NH02 315 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 COQ8AQ8NI60 647 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 LRRC20Q8TCA0 184 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 OR8D1Q8WZ84 308 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 TMEM175Q9BSA9 504 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 SLC17A9Q9BYT1 436 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 RPP21Q9H633 154 aaKnown RBP3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 WFDC1Q9HC57 220 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 LHX9Q9NQ69 397 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 RRAGDQ9NQL2 400 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 CES1P1Q9UKY3 287 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 TBX21Q9UL17 535 aa3.09□□□□□ -1.91
HMGB3P31-201ENST00000413333 BRCA1P38398 1863 aaKnown RBP3.09□□□□□ -1.92
HMGB3P31-201ENST00000413333 ATRXP46100 2492 aa3.09□□□□□ -1.92
HMGB3P31-201ENST00000413333 GPATCH8Q9UKJ3 1502 aaKnown RBP3.09□□□□□ -1.92
HMGB3P31-201ENST00000413333 PDZK1P1A8MUH7 402 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 GMDSO60547 372 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 PLEKHA8P1O95397 391 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 IGHV1-8P0DP01 117 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 IVDP26440 423 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 MNAT1P51948 309 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 PSMC5P62195 406 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 RPL23P62829 140 aaKnown RBP3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 SLAQ13239 276 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 ATP6V1FQ16864 119 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 SMUG1Q53HV7 270 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 AVPI1Q5T686 147 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 FBXW9Q5XUX1 488 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 TMEM205Q6UW68 189 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 SH2D6Q7Z4S9 175 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 CALHM1Q8IU99 346 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 UBAC2Q8NBM4 344 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 OR6K6Q8NGW6 343 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 SRSF12Q8WXF0 261 aaKnown RBP3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 PTX4Q96A99 478 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 CAMK2N2Q96S95 79 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 ZNF382Q96SR6 550 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 HMG20AQ9NP66 347 aa3.08□□□□□ -1.92
HMGB3P31-201ENST00000413333 IGHV3OR16-9A0A0B4J2B5 98 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 LOC100506127A0A0U1RQW1 187 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 DNASE2O00115 360 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 PSMD11O00231 422 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 FOXH1O75593 365 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 LCA5LO95447 670 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 IVLP07476 585 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 HTR2CP28335 458 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 CD70P32970 193 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 DEKP35659 375 aaKnown RBP3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 ARL2P36404 184 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 PPOXP50336 477 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 ATP5J2P56134 94 aa3.07□□□□□ -1.92
HMGB3P31-201ENST00000413333 OR2B8PP59922 312 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms