RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 C12orf42Q96LP6 360 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 FOXN4Q96NZ1 517 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 LGMNQ99538 433 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 SPAG8Q99932 426 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 OVOL2Q9BRP0 275 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 WRAP53Q9BUR4 548 aaKnown RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 GGACTQ9BVM4 153 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 GPR61Q9BZJ8 451 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 METTL9Q9H1A3 318 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 ZNF665Q9H7R5 613 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 MED20Q9H944 212 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 PLEKHA1Q9HB21 404 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 POPDC3Q9HBV1 291 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 CRLF2Q9HC73 371 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 GPN1Q9HCN4 374 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 MIEF1Q9NQG6 463 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 TMEM100Q9NV29 134 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 C14orf105Q9NVL8 296 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 C1orf109Q9NX04 203 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 MS4A12Q9NXJ0 267 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 PLEK2Q9NYT0 353 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 PDP1Q9P0J1 537 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 KLHL8Q9P2G9 620 aaPredicted RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 DHCR7Q9UBM7 475 aaKnown RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 GHRLQ9UBU3 117 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 SAMD4AQ9UPU9 718 aaKnown RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 PIN4Q9Y237 131 aaKnown RBP2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 V9GYQ6 96 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 NUP98P52948 1817 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 BPTFQ12830 3046 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 NRXN2Q9P2S2 1712 aa2.02□□□□□ -2.09
HMGB3P2-201ENST00000411913 QSER1Q2KHR3 1735 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 IGLV3-10A0A075B6K4 115 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 SYNJ2BP-COX16A0A087WUM0 186 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 A0A1B0GUH1 482 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 A0A1B0GW55 424 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 A0A1W2PPE3 182 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 TRAPPC13A5PLN9 417 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 RNF222A6NCQ9 220 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR6C74A6NCV1 312 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 GABRR3A8MPY1 467 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ARHGEF33A8MVX0 844 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 SNRPGP15A8MWD9 76 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 H0YCG3 227 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 H7C417 338 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 L7N2F9 121 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 HAS3O00219 553 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 GPR31O00270 319 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ZNF593O00488 134 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 RFXANKO14593 260 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 TCAPO15273 167 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 SIGLEC5O15389 551 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 TLX2O43763 284 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 MFSD11O43934 449 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 NME2P1O60361 137 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 GCM2O75603 506 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 RP2O75695 350 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 CRTAPO75718 401 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ZFAND5O76080 213 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 NXPH2O95156 264 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 TXNDC12O95881 172 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 OTCP00480 354 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 SERPINA3P01011 423 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 IL5P05113 134 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 FABP3P05413 133 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ZNF806P0C7X5 589 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 LINC00614P0C842 121 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 LINC00032P0C843 101 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUX4L2P0CJ85 424 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUX4L3P0CJ86 424 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUX4L4P0CJ87 422 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUX4L5P0CJ88 424 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUX4L6P0CJ89 424 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DUX4L7P0CJ90 424 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 OR8G3PP0DMU2 310 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 CD79AP11912 226 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ANXA8P13928 327 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 RPA2P15927 270 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 MGMTP16455 207 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ELK1P19419 428 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 PVALBP20472 110 aaPredicted RBP2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 CNR1P21554 472 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 IDSP22304 550 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 PDHA2P29803 388 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 DDTP30046 118 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 SFNP31947 248 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 KDELR2P33947 212 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 CD86P42081 329 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 SLC1A2P43004 574 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ALDH3B1P43353 468 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 TNFRSF4P43489 277 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 PLK1P53350 603 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 ACLYP53396 1101 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 CTBP2P56545 445 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 CLDN8P56748 225 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 RAB5BP61020 215 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 PKIAP61925 76 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 RAP1AP62834 184 aa2.01□□□□□ -2.09
HMGB3P2-201ENST00000411913 MRPS11P82912 194 aaKnown RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms