RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 TRBV5-5A0A0J9YX44 114 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 LOC389332A0A1B0GUA5 103 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR2M5A3KFT3 312 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 HTR3EA5X5Y0 456 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 BTBD17A6NE02 478 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 PGPEP1LA6NFU8 196 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 M0QYT0 321 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 EBAG9O00559 213 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 AP3D1O14617 1153 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 HSD17B6O14756 317 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CHUKO15111 745 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 NVLO15381 856 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 LANCL1O43813 399 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ORC5O43913 435 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 PLIN1O60240 522 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 NME2P1O60361 137 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR5F1O95221 314 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 FARS2O95363 451 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SOX14O95416 240 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 METTL18O95568 372 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 IGSF6O95976 241 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SERPINA3P01011 423 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 IFNGP01579 166 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 HLA-DPB1P04440 258 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CTSLP07711 333 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CSH1P0DML2 217 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CSH2P0DML3 217 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLUP10909 449 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CPA3P15088 417 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ERCC2P18074 760 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 FGF7P21781 194 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CALML3P27482 149 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ABCD1P33897 745 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MPIP34949 423 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 RCVRNP35243 200 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 FEN1P39748 380 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 NNMTP40261 264 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 PIP4K2AP48426 406 aaPredicted RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MAPK12P53778 367 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 IL2P60568 153 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CDK5Q00535 292 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ST3GAL3Q11203 375 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 STK3Q13188 491 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 BYSLQ13895 437 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MVPQ14764 893 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 WDR43Q15061 677 aaKnown RBP eCLIP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 NCF4Q15080 339 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 TGFBIQ15582 683 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 TTLL9Q3SXZ7 439 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 BOLA3Q53S33 107 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MPV17L2Q567V2 206 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 INTS11Q5TA45 600 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CNNM4Q6P4Q7 775 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CFAP161Q6P656 301 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CASC2Q6XLA1 102 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CCDC121Q6ZUS5 278 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 LINGO2Q7L985 606 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 KTN1-AS1Q86SY8 53 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 GALNT13Q8IUC8 556 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SNX29P2Q8IUI4 249 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 FAM177A1Q8N128 213 aaPredicted RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ZFAND2AQ8N6M9 145 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ARL6IP6Q8N6S5 226 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ANKFN1Q8N957 763 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CLEC1AQ8NC01 280 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MSANTD4Q8NCY6 345 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SMC1BQ8NDV3 1235 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR2Z1Q8NG97 314 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR4K2Q8NGD2 314 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR4C15Q8NGM1 316 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OR4A4PQ8NGN8 299 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 NANPQ8TBE9 248 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CKAP2Q8WWK9 683 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 IPCEF1Q8WWN9 437 aaPredicted RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 GTF2H4Q92759 462 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CASP10Q92851 521 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 DNASE1L2Q92874 299 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SLC35C1Q96A29 364 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SPSB4Q96A44 273 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 PPWD1Q96BP3 646 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 C11orf24Q96F05 449 aaPredicted RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 RMND5BQ96G75 393 aaPredicted RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 HPDLQ96IR7 371 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CXorf58Q96LI9 332 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 TSSK2Q96PF2 358 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 GAD1Q99259 594 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 EIF3CQ99613 913 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 C17orf62Q9BQA9 187 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 UTP23Q9BRU9 249 aaKnown RBP-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 APOOQ9BUR5 198 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 OSBPL8Q9BZF1 889 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 BPESC1Q9GZL8 116 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 VN1R1Q9GZP7 353 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MIS12Q9H081 205 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 SYT4Q9H2B2 425 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 MFSD1Q9H3U5 465 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 CXorf56Q9H5V9 222 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 AUNIPQ9H7T9 357 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 ARMT1Q9H993 441 aa-2.22□□□□□ -2.76
RNU4-88P-201ENST00000411220 UGT1A10Q9HAW8 530 aa-2.22□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms