RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 TRAPPC2LQ9UL33 140 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 MCTS1Q9ULC4 181 aaKnown RBP11.67□□□□□ -0.54
DYSF-209ENST00000410041 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
DYSF-209ENST00000410041 C9orf170A2RU37 121 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 SERPINE3A8MV23 424 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 IDSB3KWA1 339 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 BTG2P78543 158 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 THEM4Q5T1C6 240 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 TMEM268Q5VZI3 342 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 OR13H1Q8NG92 308 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 DNAJB11Q9UBS4 358 aa11.67□□□□□ -0.54
DYSF-209ENST00000410041 SHROOM3Q8TF72 1996 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 POM121BA6NF01 834 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 DUS4LO95620 317 aaKnown RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 HOXA1P49639 335 aaPredicted RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 SEZ6L2Q6UXD5 910 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 OVCH2Q7RTZ1 564 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ZNF610Q8N9Z0 462 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ST8SIA1Q92185 356 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 DNAJB12Q9NXW2 375 aaKnown RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 SCAF4O95104 1147 aaKnown RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 ECH1Q13011 328 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 FAHD2BQ6P2I3 314 aaPredicted RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 TMEM65Q6PI78 240 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ZNF775Q96BV0 537 aaPredicted RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 FAHD2AQ96GK7 314 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ZNF251Q9BRH9 671 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ZNF426Q9BUY5 554 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ICOSLGO75144 302 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 ST6GAL1P15907 406 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 OTX2P32243 289 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 EEF1A2Q05639 463 aaKnown RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 MIDNQ504T8 468 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 OR6S1Q8NH40 331 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 PLEKHF2Q9H8W4 249 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 LRP12Q9Y561 859 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 POMT1Q9Y6A1 747 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 SFT2D2O95562 160 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 HLA-DOBP13765 273 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 CALCRP30988 508 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 PTP4A1Q93096 173 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 TVP23CQ96ET8 276 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 FGF21Q9NSA1 209 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 MED29Q9NX70 200 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 PRAMEF25A6NGN4 478 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 MRPL33O75394 65 aaKnown RBP11.66□□□□□ -0.54
DYSF-209ENST00000410041 ZNF273Q14593 569 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 PRAMEF20Q5VT98 475 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 LCN15Q6UWW0 184 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 OR4N2Q8NGD1 307 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 NPAS1Q99742 590 aa11.66□□□□□ -0.54
DYSF-209ENST00000410041 MBTPS2O43462 519 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 PDGFBP01127 241 aaPredicted RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 CTRB1P17538 263 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 FKBP2P26885 142 aaKnown RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 OPRM1P35372 400 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 CTRB2Q6GPI1 263 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 SLC16A13Q7RTY0 426 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 CBLN2Q8IUK8 224 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 LINC01555Q8NAE3 123 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 PHOSPHO2Q8TCD6 241 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 SPPL3Q8TCT6 385 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 GPA33Q99795 319 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 GPR173Q9NS66 373 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 PTRH2Q9Y3E5 179 aaKnown RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 C1QCP02747 245 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 NMBP08949 121 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 PIGPP57054 158 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 RPS15P62841 145 aaKnown RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 INPP5JQ15735 1006 aaPredicted RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 TFAP2EQ6VUC0 442 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 MBD1Q9UIS9 605 aaPredicted RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 KCNAB1Q14722 419 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 SUCNR1Q9BXA5 334 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 STRADBQ9C0K7 418 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 H0Y8X5 98 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 PHOX2AO14813 284 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 RFC3P40938 356 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 FOLR3P41439 243 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 ELLP55199 621 aaPredicted RBP11.65□□□□□ -0.54
DYSF-209ENST00000410041 LSM11P83369 360 aaKnown RBP eCLIP11.65□□□□□ -0.54
DYSF-209ENST00000410041 SLC17A4Q9Y2C5 497 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 SCN1AP35498 2009 aa11.65□□□□□ -0.54
DYSF-209ENST00000410041 VAMP5O95183 116 aa11.65□□□□□ -0.55
DYSF-209ENST00000410041 HLA-DQB1P01920 261 aa11.65□□□□□ -0.55
DYSF-209ENST00000410041 RLN3Q8WXF3 142 aa11.65□□□□□ -0.55
DYSF-209ENST00000410041 ASB16Q96NS5 453 aa11.65□□□□□ -0.55
DYSF-209ENST00000410041 ADAM19Q9H013 955 aa11.65□□□□□ -0.55
DYSF-209ENST00000410041 CACNA1CQ13936 2221 aa11.65□□□□□ -0.55
DYSF-209ENST00000410041 FIGNL2A6NMB9 653 aa11.64□□□□□ -0.55
DYSF-209ENST00000410041 C4orf17Q53FE4 359 aa11.64□□□□□ -0.55
DYSF-209ENST00000410041 MAML2Q8IZL2 1156 aaPredicted RBP11.64□□□□□ -0.55
DYSF-209ENST00000410041 TMEM18Q96B42 140 aa11.64□□□□□ -0.55
DYSF-209ENST00000410041 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
DYSF-209ENST00000410041 NXPH3O95157 252 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms