RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 OR2Z1Q8NG97 314 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 OR56B2PQ8NGI1 322 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 OR6Q1Q8NGQ2 317 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 HGDQ93099 445 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 NUDT9Q9BW91 350 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 SLIRPQ9GZT3 109 aaKnown RBP1.66□□□□□ -2.14
PMS1-203ENST00000409593 LINC00574Q9H8X3 128 aa1.66□□□□□ -2.14
PMS1-203ENST00000409593 PDP1Q9P0J1 537 aaPredicted RBP1.66□□□□□ -2.14
PMS1-203ENST00000409593 PRAMEF26H0Y7S4 382 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 SIRPB1O00241 398 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 IGLV7-43P04211 117 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 CMC4P56277 68 aaPredicted RBP1.65□□□□□ -2.15
PMS1-203ENST00000409593 TPTE2P1Q5T6R2 138 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 TBPL2Q6SJ96 375 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 MDP1Q86V88 176 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 PHOSPHO2Q8TCD6 241 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 RNF145Q96MT1 663 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 NEUROG2Q9H2A3 272 aa1.65□□□□□ -2.15
PMS1-203ENST00000409593 SMCO3A2RU48 225 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 CPLX1O14810 134 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 NMT2O60551 498 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 MT-ND4P03905 459 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 ZNF35P13682 527 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 RAB7AP51149 207 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 NDUFA8P51970 172 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 MRPL23Q16540 153 aaKnown RBP1.64□□□□□ -2.15
PMS1-203ENST00000409593 RTL4Q6ZR62 310 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 NANOGNBQ7Z5D8 188 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 GTPBP8Q8N3Z3 284 aaPredicted RBP1.64□□□□□ -2.15
PMS1-203ENST00000409593 NRBF2Q96F24 287 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 RETNQ9HD89 108 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 LRRC42Q9Y546 428 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 PRR14LQ5THK1 2151 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 HRES1P13985 223 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 CSNK2A2P19784 350 aaPredicted RBP1.64□□□□□ -2.15
PMS1-203ENST00000409593 POLR2IP36954 125 aaKnown RBP1.64□□□□□ -2.15
PMS1-203ENST00000409593 TAGLN2P37802 199 aaKnown RBP1.64□□□□□ -2.15
PMS1-203ENST00000409593 CRISP1P54107 249 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 ACTR3P61158 418 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 SEMG2Q02383 582 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 TRAM2Q15035 370 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 CHRNA6Q15825 494 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 LUZP6Q538Z0 58 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 SMARCD3Q6STE5 483 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 OR7G2Q8NG99 324 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 OR4A4PQ8NGN8 299 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 SLC2A14Q8TDB8 520 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 HAUS1Q96CS2 278 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 NT5C3AQ9H0P0 336 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 SLC39A1Q9NY26 324 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 TAS2R5Q9NYW4 299 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 SVILO95425 2214 aa1.64□□□□□ -2.15
PMS1-203ENST00000409593 PCDH11XQ9BZA7 1347 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 ARPC4-TTLL3A0A0A6YYG9 625 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 TAAR5O14804 337 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 OR7C2O60412 319 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 AQP8O94778 261 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 TROVE2P10155 538 aaKnown RBP eCLIP1.63□□□□□ -2.15
PMS1-203ENST00000409593 EIF2S2P20042 333 aaKnown RBP1.63□□□□□ -2.15
PMS1-203ENST00000409593 OR1E1P30953 314 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 MEF2CQ06413 473 aaPredicted RBP1.63□□□□□ -2.15
PMS1-203ENST00000409593 SELENBP1Q13228 472 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 C22orf42Q6IC83 251 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 LINC00336Q6ZUF6 198 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 DAZ4Q86SG3 579 aaKnown RBP1.63□□□□□ -2.15
PMS1-203ENST00000409593 FAM228AQ86W67 206 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 CBLN2Q8IUK8 224 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 LYPD6BQ8NI32 183 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 ACMSDQ8TDX5 336 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 DAZ1Q9NQZ3 744 aaKnown RBP1.63□□□□□ -2.15
PMS1-203ENST00000409593 COX16Q9P0S2 106 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 FARSAQ9Y285 508 aaKnown RBP1.63□□□□□ -2.15
PMS1-203ENST00000409593 ASB3Q9Y575 518 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 ZSWIM8A7E2V4 1837 aa1.63□□□□□ -2.15
PMS1-203ENST00000409593 HEATR9A2RTY3 570 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 LSM1O15116 133 aaKnown RBP1.62□□□□□ -2.15
PMS1-203ENST00000409593 DEDDO75618 318 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 PRKACBP22694 351 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 TAS2R43P59537 309 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 RAB10P61026 200 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 BTN1A1Q13410 526 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 MAJINQ3KP22 176 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 HSP90AB3PQ58FF7 597 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 USP50Q70EL3 339 aaPredicted RBP1.62□□□□□ -2.15
PMS1-203ENST00000409593 NT5DC3Q86UY8 548 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 C19orf18Q8NEA5 215 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 OR1L1Q8NH94 360 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 RXFP4Q8TDU9 374 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 KCNS1Q96KK3 526 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 PKIBQ9C010 78 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 TAS2R1Q9NYW7 299 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 IL37Q9NZH6 218 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 PITPNC1Q9UKF7 332 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 SAMHD1Q9Y3Z3 626 aaKnown RBP1.62□□□□□ -2.15
PMS1-203ENST00000409593 HES2Q9Y543 173 aa1.62□□□□□ -2.15
PMS1-203ENST00000409593 IGKV1-27A0A075B6S5 117 aa1.61□□□□□ -2.15
PMS1-203ENST00000409593 IGHV3OR16-9A0A0B4J2B5 98 aa1.61□□□□□ -2.15
PMS1-203ENST00000409593 AP3B1O00203 1094 aa1.61□□□□□ -2.15
PMS1-203ENST00000409593 GABRPO00591 440 aa1.61□□□□□ -2.15
PMS1-203ENST00000409593 NDUFAB1O14561 156 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms