RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 DCXRQ7Z4W1 244 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF295-AS1Q8N0V1 137 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 DTX3Q8N9I9 347 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 CCDC54Q8NEL0 328 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 OR52I2Q8NH67 350 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 RNF133Q8WVZ7 376 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ASB5Q8WWX0 329 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 FAM3DQ96BQ1 224 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 RADILQ96JH8 1075 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 RNF170Q96K19 258 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ARL5BQ96KC2 179 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 SGCZQ96LD1 299 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 SIGLEC12Q96PQ1 595 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 FYTTD1Q96QD9 318 aaKnown RBP11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 SCPEP1Q9HB40 452 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 GALNT9Q9HCQ5 603 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 UPB1Q9UBR1 384 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF107Q9UII5 783 aaPredicted RBP11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 PCNX3Q9H6A9 2034 aa11.41□□□□□ -0.58
SMARCB1-203ENST00000407082 TRAV17A0A0B4J275 112 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 METTL21EPA6NDL7 271 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 GGT3PA6NGU5 568 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 H3BML4 177 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 H7C417 338 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 SSNA1O43805 119 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 NEURL1O76050 574 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 PMS2P2O95744 297 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 GSTT2P0CG29 244 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 IGFBP3P17936 291 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 RAB6AP20340 208 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 HTR2CP28335 458 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 PRSS3P35030 304 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 RCVRNP35243 200 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 DSCR4P56555 118 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 CSNK2A1P68400 391 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 IFITM2Q01629 132 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 SF3B4Q15427 424 aaKnown RBP eCLIP11.4□□□□□ -0.583e-8■■■■□ 24.1
SMARCB1-203ENST00000407082 TAF13Q15543 124 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 KCNMB1Q16558 191 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 GSG1Q2KHT4 349 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 SLC25A25Q6KCM7 469 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 LRFN4Q6PJG9 635 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF767PQ75MW2 155 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 MDGA2Q7Z553 956 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 GLCCI1Q86VQ1 547 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 CDH26Q8IXH8 852 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF808Q8N4W9 903 aaPredicted RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 MDS2Q8NDY4 140 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 NOXO1Q8NFA2 376 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 OR10G3Q8NGC4 313 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 INTS12Q96CB8 462 aaKnown RBP11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 CCDC120Q96HB5 630 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 SORCS2Q96PQ0 1159 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 ANGPTL4Q9BY76 406 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 C20orf85Q9H1P6 137 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 MTFP1Q9UDX5 166 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF222Q9UK12 451 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 RCE1Q9Y256 329 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 POLR1DQ9Y2S0 133 aa11.4□□□□□ -0.58
SMARCB1-203ENST00000407082 TRAV8-7A0A075B6U6 113 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 C2orf72A6NCS6 295 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SNRPGP15A8MWD9 76 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF878C9JN71 531 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SULT2B1O00204 365 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 DNPH1O43598 174 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SRSF10O75494 262 aaKnown RBP11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 CTAG2O75638 210 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 GPANK1O95872 356 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 APOC1P02654 83 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 MT-ND4P03905 459 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SP1P08047 785 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 AKAIN1P0CW23 69 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 HLA-DOBP13765 273 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 CD46P15529 392 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF17P17021 662 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 HSD11B1P28845 292 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 POU3F4P49335 361 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ETFDHQ16134 617 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 C2orf76Q3KRA6 126 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF766Q5HY98 468 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF782Q6ZMW2 699 aaPredicted RBP11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ESPNLQ6ZVH7 1005 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SERPINA12Q8IW75 414 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 IZUMO1Q8IYV9 350 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 GTPBP8Q8N3Z3 284 aaPredicted RBP11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 FAM109AQ8N4B1 249 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 POC1BQ8TC44 478 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ST7LQ8TDW4 575 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 ASB13Q8WXK3 278 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SLAMF6Q96DU3 332 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 OR5B2Q96R09 309 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 AMELYQ99218 206 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SLX1AQ9BQ83 275 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 MRPL13Q9BYD1 178 aaKnown RBP11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 CENPMQ9NSP4 180 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SCP2D1Q9UJQ7 156 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 SLC22A13Q9Y226 551 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms