RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SP140LQ9H930 580 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 EXOSC4Q9NPD3 245 aaKnown RBP17.72■□□□□ 0.43
CHKB-201ENST00000406938 NDUFA13Q9P0J0 144 aa17.72■□□□□ 0.43
CHKB-201ENST00000406938 GABRPO00591 440 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 TMBIM6P55061 237 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 LSM3P62310 102 aaKnown RBP17.71■□□□□ 0.43
CHKB-201ENST00000406938 TMEM244Q5VVB8 128 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 COMMD2Q86X83 199 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 ABHD4Q8TB40 342 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 RAB2BQ8WUD1 216 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 ADGRG4Q8IZF6 3080 aa17.71■□□□□ 0.43
CHKB-201ENST00000406938 A0A0U1RQV5 110 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 SC5DO75845 299 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 ACHEP22303 614 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 CTF1Q16619 201 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 TMEM91Q6ZNR0 172 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 RFPL4BQ6ZWI9 263 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 OR2AE1Q8NHA4 323 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 ZNF420Q8TAQ5 688 aaPredicted RBP17.7■□□□□ 0.42
CHKB-201ENST00000406938 GPR148Q8TDV2 347 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 APOBEC3DQ96AK3 386 aaPredicted RBP17.7■□□□□ 0.42
CHKB-201ENST00000406938 OR14A2Q96R54 314 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 CENPOQ9BU64 300 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 OR51B6Q9H340 312 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 GPR84Q9NQS5 396 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 HHLA2Q9UM44 414 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 SSR3Q9UNL2 185 aa17.7■□□□□ 0.42
CHKB-201ENST00000406938 IGHV2OR16-5A0A0B4J2B6 119 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 TRDV1A0A1B0GX56 115 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 ICMTO60725 284 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 NOL3O60936 208 aaKnown RBP17.69■□□□□ 0.42
CHKB-201ENST00000406938 SERPINA3P01011 423 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 NGFP01138 241 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 IGLV3-1P01715 115 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 ZNF35P13682 527 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 MAGEB1P43366 347 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 NAAAQ02083 359 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 GLYATL3Q5SZD4 288 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 TSEN15Q8WW01 171 aaKnown RBP17.69■□□□□ 0.42
CHKB-201ENST00000406938 LYZL4Q96KX0 146 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 KCNS3Q9BQ31 491 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 NPDC1Q9NQX5 325 aaPredicted RBP17.69■□□□□ 0.42
CHKB-201ENST00000406938 RSL24D1Q9UHA3 163 aaKnown RBP17.69■□□□□ 0.42
CHKB-201ENST00000406938 RTTNQ86VV8 2226 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 TRBV5-5A0A0J9YX44 114 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 A0A1B0GTI1 187 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 A0A1B0GVI7 797 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 SYT7O43581 403 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 SMPD2O60906 423 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 OCM2P0CE71 109 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 GALP22466 123 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 CALCRP30988 508 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 Q499Y3 187 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 ACSM3Q53FZ2 586 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 C22orf42Q6IC83 251 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 SGK3Q96BR1 496 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 REEP6Q96HR9 211 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 SOX7Q9BT81 388 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 FAM192AQ9GZU8 254 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 RNF167Q9H6Y7 350 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 TBCCD1Q9NVR7 557 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 TXNL4BQ9NX01 149 aaKnown RBP17.69■□□□□ 0.42
CHKB-201ENST00000406938 EIF3KQ9UBQ5 218 aaKnown RBP17.69■□□□□ 0.42
CHKB-201ENST00000406938 NDRG3Q9UGV2 375 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 PRR14LQ5THK1 2151 aa17.69■□□□□ 0.42
CHKB-201ENST00000406938 H3BMQ9 156 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 XRCC2O43543 280 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 FAM157BP0CG42 384 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 CCL1P22362 96 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 TGFBR1P36897 503 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 SOX2P48431 317 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 VBP1P61758 197 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 NCS1P62166 190 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 ZMAT1Q5H9K5 638 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 GDPGP1Q6ZNW5 385 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 LINC01560Q8TB33 94 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 FAM71F1Q96KD3 344 aaPredicted RBP17.68■□□□□ 0.42
CHKB-201ENST00000406938 STARD10Q9Y365 291 aa17.68■□□□□ 0.42
CHKB-201ENST00000406938 ZNF879B4DU55 563 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 J3QW42 95 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 PCSK6P29122 969 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 FGF9P31371 208 aaPredicted RBP17.67■□□□□ 0.42
CHKB-201ENST00000406938 FAM27D1Q5T7N8 215 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 TMEM108Q6UXF1 575 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 CEACAM19Q7Z692 300 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 OR13C3Q8NGS6 347 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 C12orf43Q96C57 262 aaKnown RBP17.67■□□□□ 0.42
CHKB-201ENST00000406938 BCL7BQ9BQE9 202 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 RGCCQ9H4X1 137 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 DHDHQ9UQ10 334 aa17.67■□□□□ 0.42
CHKB-201ENST00000406938 TUBAL3A6NHL2 446 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 ZNF701M0R085 212 aaPredicted RBP17.66■□□□□ 0.42
CHKB-201ENST00000406938 GATBO75879 557 aaKnown RBP17.66■□□□□ 0.42
CHKB-201ENST00000406938 CRYAAP02489 173 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 CD40P25942 277 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 ZNF92Q03936 586 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 SPOCK1Q08629 439 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 DOK3Q7L591 496 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 TMEM106AQ96A25 262 aa17.66■□□□□ 0.42
CHKB-201ENST00000406938 SPSB4Q96A44 273 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms