RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CSMD1Q96PZ7 3565 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 ACOD1A6NK06 481 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 ATE1O95260 518 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 PNPP00491 289 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 IGHV3-13P01766 116 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 CD53P19397 219 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 OR12D2P58182 307 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 PGAM5Q96HS1 289 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 EDARQ9UNE0 448 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 PLEKHA6Q9Y2H5 1048 aa25.15■■□□□ 1.62
USP42-202ENST00000404008 EXOSC1Q9Y3B2 195 aaKnown RBP25.15■■□□□ 1.62
USP42-202ENST00000404008 TBX1O43435 398 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 RPP14O95059 124 aaKnown RBP25.14■■□□□ 1.61
USP42-202ENST00000404008 TACSTD2P09758 323 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 MYL12AP19105 171 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 SELENOVP59797 346 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 PSG7Q13046 419 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 GK2Q14410 553 aaPredicted RBP25.14■■□□□ 1.61
USP42-202ENST00000404008 EGFL6Q8IUX8 553 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 SYS1Q8N2H4 156 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 ZNF786Q8N393 782 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 STX19Q8N4C7 294 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 OR2AE1Q8NHA4 323 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 CMBLQ96DG6 245 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 C4orf36Q96KX1 117 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 OR10A2Q9H208 303 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 ISG20L2Q9H9L3 353 aaKnown RBP25.14■■□□□ 1.61
USP42-202ENST00000404008 PAK1IP1Q9NWT1 392 aaPredicted RBP25.14■■□□□ 1.61
USP42-202ENST00000404008 TPRKBQ9Y3C4 175 aa25.14■■□□□ 1.61
USP42-202ENST00000404008 ARFGEF3Q5TH69 2177 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 PTGES3LE9PB15 166 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 J3QLW9 94 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 XRCC2O43543 280 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 RAC2P15153 192 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 ZNF19P17023 458 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 CRHBPP24387 322 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 SNRPD2P62316 118 aaKnown RBP25.13■■□□□ 1.61
USP42-202ENST00000404008 SLC35A2P78381 396 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 ZNF92Q03936 586 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 MED21Q13503 144 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 RBM48Q5RL73 367 aaKnown RBP25.13■■□□□ 1.61
USP42-202ENST00000404008 OR8B12Q8NGG6 310 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 RORBQ92753 470 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 HAVCR1Q96D42 359 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 PBOV1Q9GZY1 135 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 MOB1AQ9H8S9 216 aa25.13■■□□□ 1.61
USP42-202ENST00000404008 LOC110117498-PIK3R3F6TDL0 507 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 CDK1P06493 297 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 C21orf33P30042 268 aaPredicted RBP25.12■■□□□ 1.61
USP42-202ENST00000404008 PIGTQ969N2 578 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 RNF166Q96A37 237 aaPredicted RBP25.12■■□□□ 1.61
USP42-202ENST00000404008 SPSB4Q96A44 273 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 SGK3Q96BR1 496 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 SIGLEC11Q96RL6 698 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 DUSP21Q9H596 190 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 G6PC2Q9NQR9 355 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 NUFIP1Q9UHK0 495 aaKnown RBP25.12■■□□□ 1.61
USP42-202ENST00000404008 CLEC2DQ9UHP7 191 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 SNX5Q9Y5X3 404 aa25.12■■□□□ 1.61
USP42-202ENST00000404008 A0A1W2PPW3 197 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 OVOL3O00110 214 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 KITLGP21583 273 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 TIGD6Q17RP2 521 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 PGAP1Q75T13 922 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 MRPL21Q7Z2W9 205 aaKnown RBP25.11■■□□□ 1.61
USP42-202ENST00000404008 SGCDQ92629 289 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 MYDGFQ969H8 173 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 PELI1Q96FA3 418 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 TAAR3PQ9P1P4 343 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 OR52A1Q9UKL2 312 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 CAB39Q9Y376 341 aaPredicted RBP25.11■■□□□ 1.61
USP42-202ENST00000404008 LRRC42Q9Y546 428 aa25.11■■□□□ 1.61
USP42-202ENST00000404008 PSMB10P40306 273 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 BCL2L15Q5TBC7 163 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 CDH24Q86UP0 819 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 CATSPERDQ86XM0 798 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 NINJ1Q92982 152 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 REEP6Q96HR9 211 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 REPIN1Q9BWE0 567 aaKnown RBP25.1■■□□□ 1.61
USP42-202ENST00000404008 RGCCQ9H4X1 137 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 OPA3Q9H6K4 179 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 CHCHD3Q9NX63 227 aaKnown RBP25.1■■□□□ 1.61
USP42-202ENST00000404008 PURGQ9UJV8 347 aaKnown RBP25.1■■□□□ 1.61
USP42-202ENST00000404008 FBXO9Q9UK97 447 aaPredicted RBP25.1■■□□□ 1.61
USP42-202ENST00000404008 GTF2A1LQ9UNN4 478 aa25.1■■□□□ 1.61
USP42-202ENST00000404008 BMP4P12644 408 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 DNASE1P24855 282 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 PRSS12P56730 875 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 GFOD2Q3B7J2 385 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 ALKBH6Q3KRA9 238 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 KLHL36Q8N4N3 616 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 PPP1R14AQ96A00 147 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 CACNG6Q9BXT2 260 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 CXorf56Q9H5V9 222 aa25.09■■□□□ 1.61
USP42-202ENST00000404008 A0A0U1RQV5 110 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 ALDH3B1P43353 468 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 MOGQ16653 247 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 NKPD1Q17RQ9 610 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 OR2G6Q5TZ20 316 aa25.08■■□□□ 1.61
USP42-202ENST00000404008 OR2T2Q6IF00 324 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms