RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 POMPQ9Y244 141 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 N6AMT1Q9Y5N5 214 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 COMMD3-BMI1R4GMX3 469 aa4.87□□□□□ -1.63
HMGB1P20-201ENST00000402555 NBEAL1Q6ZS30 2694 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 FBN3Q75N90 2809 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ARRDC5A6NEK1 342 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 RNF212BA8MTL3 300 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 F5H5P2 479 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 M0R135 149 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF593O00488 134 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 MLNRO43193 412 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 PAX4O43316 350 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 PLPP2O43688 288 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TIPRLO75663 272 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 CYB5R3P00387 301 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 IFNGP01579 166 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 IGHV2-70P01814 119 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 HLA-DPB1P04440 258 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 MSMBP08118 114 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 SBK2P0C263 348 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF3P17036 446 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 HNF1AP20823 631 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TUBG1P23258 451 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TNFSF4P23510 183 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 FMO3P31513 532 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 GRK5P34947 590 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ENTPD1P49961 510 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC25A1P53007 311 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TPTEP56180 551 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 SEC61A1P61619 476 aaKnown RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 LCN2P80188 198 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 HOXA4Q00056 320 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 BNIP1Q12981 228 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ECH1Q13011 328 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 GK2Q14410 553 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 GINS1Q14691 196 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZMYND11Q15326 602 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAM201AQ5SY85 155 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 GLYATL3Q5SZD4 288 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 LINC01590Q5TEZ4 76 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM236Q5W0B7 351 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAHD2BQ6P2I3 314 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 CXXC5Q7LFL8 322 aaKnown RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 DPY19L4Q7Z388 723 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ERI1Q8IV48 349 aaKnown RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 PHC2Q8IXK0 858 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF283Q8N7M2 679 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 BBS1Q8NFJ9 593 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR8G5Q8NG78 346 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR5L1Q8NGL2 311 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR6N2Q8NGY6 317 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR51F2Q8NH61 342 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF420Q8TAQ5 688 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ST7LQ8TDW4 575 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM186Q96B77 213 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLAMF6Q96DU3 332 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZMYND19Q96E35 227 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF799Q96GE5 643 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 FAHD2AQ96GK7 314 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 COG8Q96MW5 612 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF582Q96NG8 517 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 SIGLEC11Q96RL6 698 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 DIRC2Q96SL1 478 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 AMELYQ99218 206 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 GAL3ST1Q99999 423 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 COPS4Q9BT78 406 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 OR51V1Q9H2C8 321 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 NTN4Q9HB63 628 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TUBG2Q9NRH3 451 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 CMC2Q9NRP2 79 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM106BQ9NUM4 274 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 DNAJB9Q9UBS3 223 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 KCNG2Q9UJ96 466 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 BAIAP2Q9UQB8 552 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 PPP1R3CQ9UQK1 317 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 NPTNQ9Y639 398 aa4.86□□□□□ -1.63
HMGB1P20-201ENST00000402555 LOC105371242A0A075B767 164 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 CD300LBA8K4G0 201 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 IQCF6A8MYZ5 107 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 TMEM178BH3BS89 294 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 M0R129 80 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SURF4O15260 269 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SELENOFO60613 162 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 MITFO75030 526 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 GLCEO94923 617 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 OSMP13725 252 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 ADRA2CP18825 462 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 TNFRSF1AP19438 455 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 CA6P23280 308 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZFP36P26651 326 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 GSTT1P30711 240 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 PMELP40967 661 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 NAA10P41227 235 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 BTG1P62324 171 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 ZNF92Q03936 586 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 SLC3A1Q07837 685 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 MALLQ13021 153 aa4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 EIF2B1Q14232 305 aaKnown RBP4.85□□□□□ -1.63
HMGB1P20-201ENST00000402555 GK3PQ14409 553 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms