RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 CLDN6P56747 220 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 ZNF121P58317 390 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RAP1BP61224 184 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RAP1AP62834 184 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 DMWDQ09019 674 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 TDGQ13569 410 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 ZNF585AQ6P3V2 769 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 TMPPEQ6ZT21 453 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 ARHGEF39Q8N4T4 335 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 ELP5Q8TE02 316 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 THADAQ6YHU6 1953 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 CD1AP06126 327 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RPL35P42766 123 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 CLVS2Q5SYC1 327 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 TMEM17Q86X19 198 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 SLC22A24Q8N4F4 322 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 RAB22AQ9UL26 194 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 KCNK7Q9Y2U2 307 aa11.28□□□□□ -0.6
PPP4R1-202ENST00000400555 CACNA1GO43497 2377 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 DNAJC13O75165 2243 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 VSIG8P0DPA2 414 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 ITGA3P26006 1051 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 OR13C8Q8NGS7 320 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 ZNF519Q8TB69 540 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 THRSPQ92748 146 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 HOXB13Q92826 284 aaPredicted RBP11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.6
PPP4R1-202ENST00000400555 TEX13DA0A0J9YY54 714 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 BCAT2O15382 392 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 CELA2AP08217 269 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 LAP3P28838 519 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 BLVRBP30043 206 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 CLEC9AQ6UXN8 241 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 TMEM229BQ8NBD8 167 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 OR5H2Q8NGV7 314 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 ZNF275Q9NSD4 429 aaPredicted RBP11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 EHFQ9NZC4 300 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 STMND1H3BQB6 276 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 H3BUI4 141 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 TTRP02766 147 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 TMEM225BP0DP42 221 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 NAGAP17050 411 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 FXYD4P59646 89 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 SYT13Q7L8C5 426 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 OR2W3Q7Z3T1 314 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 BPIFCQ8NFQ6 507 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 OR5M9Q8NGP3 310 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 OR1S2Q8NGQ3 325 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 ZNF160Q9HCG1 818 aa11.27□□□□□ -0.61
PPP4R1-202ENST00000400555 FAM230AA0A1W2PPH8 454 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 KRBOX1C9JBD0 128 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 F8W036 122 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 CCNOP22674 350 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 GABRA4P48169 554 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 BLOC1S1P78537 153 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 C11orf87Q6NUJ2 197 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 OR1S1Q8NH92 325 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 SLC39A7Q92504 469 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 GNRHR2Q96P88 292 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 MUC22E2RYF6 1773 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 MFSD2BA6NFX1 497 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 RAB27BO00194 218 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 ZP3P21754 424 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 GABREP78334 506 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 FGL1Q08830 312 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 FAM180AQ6UWF9 173 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 C20orf196Q8IYI0 205 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 TMEM156Q8N614 296 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 BVESQ8NE79 360 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 ASB10Q8WXI3 467 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 CCNL2Q96S94 520 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 TMPRSS13Q9BYE2 586 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 HRH3Q9Y5N1 445 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 EP300Q09472 2414 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 TRAV14DV4A0A0A6YYC5 116 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 C9orf170A2RU37 121 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 ANGPTL7O43827 346 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 IGHG1P01857 330 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 HOXD4P09016 255 aaPredicted RBP11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 PATE4P0C8F1 98 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 FAHP16930 419 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 LY6G6FQ5SQ64 297 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 SLC25A45Q8N413 288 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 G6PC2Q9NQR9 355 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 PLEK2Q9NYT0 353 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 MLXQ9UH92 298 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 RARRES3Q9UL19 164 aa11.26□□□□□ -0.61
PPP4R1-202ENST00000400555 CNOT1A5YKK6 2376 aaKnown RBP11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 MED19A0JLT2 244 aaPredicted RBP11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 FAM74A7A6NL05 159 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 FCGR2AP12318 317 aa11.25□□□□□ -0.61
PPP4R1-202ENST00000400555 GLRA1P23415 457 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms