RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NGFP01138 241 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 TMIGD3P0DMS9 266 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 PSMA1P25786 263 aaKnown RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 HSD11B1P28845 292 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 PTGER4P35408 488 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 TPBGQ13641 420 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 RNPS1Q15287 305 aaKnown RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 C10orf128Q5T292 105 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 FBXW9Q5XUX1 488 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 FAM220AQ7Z4H9 259 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 ACBD4Q8NC06 268 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 FAM57AQ8TBR7 257 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 WNT5BQ9H1J7 359 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 FZR1Q9UM11 496 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 AK6Q9Y3D8 172 aaKnown RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 TRAV8-7A0A075B6U6 113 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 MAS1P04201 325 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 HTR5AP47898 357 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 CX3CR1P49238 355 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 AP2S1P53680 142 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 ERVS71-1P61550 626 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 DGUOKQ16854 277 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 YIF1BQ5BJH7 314 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 ZNF584Q8IVC4 421 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 OR51A2Q8NGJ7 313 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 PRR7Q8TB68 274 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 RNF133Q8WVZ7 376 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 FCGR1BQ92637 280 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 GMPPAQ96IJ6 420 aaPredicted RBP10.2□□□□□ -0.78
SKA3-203ENST00000400018 ST6GAL2Q96JF0 529 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 NOX4Q9NPH5 578 aa10.2□□□□□ -0.78
SKA3-203ENST00000400018 LRRK2Q5S007 2527 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 LOC110117498-PIK3R3F6TDL0 507 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 SGCEO43556 437 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 PAHP00439 452 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 FOSL1P15407 271 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 IDH3GP51553 393 aaPredicted RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 RIDAP52758 137 aaKnown RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 RAB1AP62820 205 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 HOXA4Q00056 320 aaPredicted RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 KLRB1Q12918 225 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ALKBH1Q13686 389 aaKnown RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 HLXQ14774 488 aaPredicted RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 SLC25A35Q3KQZ1 300 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 C1orf185Q5T7R7 199 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 NSUN5P2Q63ZY6 315 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 GDPD3Q7L5L3 318 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ZNF101Q8IZC7 436 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ZNF433Q8N7K0 673 aaPredicted RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 BHLHE23Q8NDY6 225 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 OR8B12Q8NGG6 310 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 SCPEP1Q9HB40 452 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 G6PC2Q9NQR9 355 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 RCE1Q9Y256 329 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 NBPF19A0A087WUL8 3843 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ARPC4-TTLL3A0A0A6YYG9 625 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ISPDA4D126 451 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 C5orf49A4QMS7 147 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 OR4C45A6NMZ5 311 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 FAM25AB3EWG3 89 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 FAM25CB3EWG5 89 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 FAM25GB3EWG6 89 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 IL2RAP01589 272 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 FAM157BP0CG42 384 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 TOR2AQ5JU69 321 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 RPUSD3Q6P087 351 aaKnown RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 MDP1Q86V88 176 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 KDF1Q8NAX2 398 aaPredicted RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 OR5AK2Q8NH90 309 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 SMIM19Q96E16 107 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 C4orf45Q96LM5 186 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ATF6BQ99941 703 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 POFUT1Q9H488 388 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ZNF629Q9UEG4 869 aaPredicted RBP10.19□□□□□ -0.78
SKA3-203ENST00000400018 STUB1Q9UNE7 303 aa10.19□□□□□ -0.78
SKA3-203ENST00000400018 ZNF724A8MTY0 619 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 CTDSP2O14595 271 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 PRRG2O14669 202 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 TSPAN4O14817 238 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 SS18L1O75177 396 aaPredicted RBP10.18□□□□□ -0.78
SKA3-203ENST00000400018 TTRP02766 147 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 ACTA2P62736 377 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 ACTG2P63267 376 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 FAM27BQ5VT28 67 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 ZNF544Q6NX49 715 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 C6orf62Q9GZU0 229 aaPredicted RBP10.18□□□□□ -0.78
SKA3-203ENST00000400018 CELSR2Q9HCU4 2923 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 OR52A1Q9UKL2 312 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 IRGMA1A4Y4 181 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 NKX2-6A6NCS4 301 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 FIGNL2A6NMB9 653 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 AHRRA9YTQ3 701 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 PLPP2O43688 288 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 GABRA5P31644 462 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 MRPS34P82930 218 aaKnown RBP10.18□□□□□ -0.78
SKA3-203ENST00000400018 PLA2G7Q13093 441 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 PCK2Q16822 640 aa10.18□□□□□ -0.78
SKA3-203ENST00000400018 TBRG1Q3YBR2 411 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms