RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 C11orf88Q6PI97 169 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 FAM57BQ71RH2 274 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 DOK3Q7L591 496 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 TRAPPC6BQ86SZ2 158 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 FJX1Q86VR8 437 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 CMBLQ96DG6 245 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 WDR89Q96FK6 387 aaPredicted RBP12.23□□□□□ -0.45
PRAME-202ENST00000398743 FAM71F1Q96KD3 344 aaPredicted RBP12.23□□□□□ -0.45
PRAME-202ENST00000398743 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
PRAME-202ENST00000398743 NAA11Q9BSU3 229 aaPredicted RBP12.23□□□□□ -0.45
PRAME-202ENST00000398743 NELFAQ9H3P2 528 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 ZNF319Q9P2F9 582 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 FBLN5Q9UBX5 448 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 MAB21L2Q9Y586 359 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 IGHV3-15A0A0B4J1V0 119 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 LINC00862A6NCI5 91 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 TMEM14DPA8MWL7 114 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 DISC1C4P0D8 188 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 CXCL2P19875 107 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 MSR1P21757 451 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 GSK3AP49840 483 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 ZXDAP98168 799 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 RIPPLY1Q0D2K3 151 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 POU4F3Q15319 338 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 GFOD2Q3B7J2 385 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 SCGB2B2Q4G0G5 96 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 C10orf128Q5T292 105 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 TMED4Q7Z7H5 227 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 ZNF101Q8IZC7 436 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 OR4S1Q8NGB4 309 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 ASB13Q8WXK3 278 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 NTNG2Q96CW9 530 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
PRAME-202ENST00000398743 COL6A3P12111 3177 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 LEUTXA8MZ59 168 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 H3BUI4 141 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 CBR3O75828 277 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 WDPCPO95876 746 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 ESCO2Q56NI9 601 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 RNASE10Q5GAN6 216 aaKnown RBP12.22□□□□□ -0.45
PRAME-202ENST00000398743 TMEM54Q969K7 222 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 ZNF385AQ96PM9 386 aaKnown RBP12.22□□□□□ -0.45
PRAME-202ENST00000398743 SPACA5Q96QH8 159 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 PRRT1Q99946 306 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 PIGQQ9BRB3 760 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 EDEM2Q9BV94 578 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
PRAME-202ENST00000398743 SLC2A8Q9NY64 477 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 B4E171 279 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 MCRIP1C9JLW8 97 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 IGHEP01854 428 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 CSN2P05814 226 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 GP1BAP07359 652 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 HCKP08631 526 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 TSPAN7P41732 249 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 SEC61A1P61619 476 aaKnown RBP12.22□□□□□ -0.45
PRAME-202ENST00000398743 RAC1P63000 192 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 CLLU1Q5K131 121 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 ATPAF1Q5TC12 328 aaPredicted RBP12.22□□□□□ -0.45
PRAME-202ENST00000398743 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 OR2W3Q7Z3T1 314 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 OR5AS1Q8N127 324 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 ARMC10Q8N2F6 343 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 GJC3Q8NFK1 279 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 OR9K2Q8NGE7 335 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 OR13C8Q8NGS7 320 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 OR10R2Q8NGX6 335 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 TMEM41AQ96HV5 264 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 UCN2Q96RP3 112 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 SLC6A7Q99884 636 aa12.22□□□□□ -0.45
PRAME-202ENST00000398743 MRPS28Q9Y2Q9 187 aaKnown RBP12.22□□□□□ -0.45
PRAME-202ENST00000398743 MUC3AQ02505 3323 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 HMSDA8MTL9 139 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 CFDP00746 253 aaPredicted RBP12.21□□□□□ -0.45
PRAME-202ENST00000398743 CHRM2P08172 466 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 GNB3P16520 340 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 ANOS1P23352 680 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 CTSSP25774 331 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 ZNF133P52736 654 aaPredicted RBP12.21□□□□□ -0.45
PRAME-202ENST00000398743 ZMYND11Q15326 602 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 NKPD1Q17RQ9 610 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 PHYHD1Q5SRE7 291 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 ZNF468Q5VIY5 522 aaPredicted RBP12.21□□□□□ -0.45
PRAME-202ENST00000398743 DCAF12L2Q5VW00 463 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 CD163Q86VB7 1156 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 C12orf45Q8N5I9 185 aaPredicted RBP12.21□□□□□ -0.45
PRAME-202ENST00000398743 NUDCD2Q8WVJ2 157 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 PGAM5Q96HS1 289 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 SGCZQ96LD1 299 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 IFT46Q9NQC8 304 aa12.21□□□□□ -0.45
PRAME-202ENST00000398743 RPS10-NUDT3A0A1W2PQS6 291 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 GJE1A6NN92 205 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 MASP2O00187 686 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 TNFSF11O14788 317 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 ARPC5O15511 151 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 CD63P08962 238 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 ENPP1P22413 925 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 GMFBP60983 142 aa12.2□□□□□ -0.46
PRAME-202ENST00000398743 RAB14P61106 215 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms