RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ALKBH2Q6NS38 261 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 DND1Q8IYX4 353 aaKnown RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ARRDC1Q8N5I2 433 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CCDC74BQ96LY2 380 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 VSX1Q9NZR4 365 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM269A0A1B0GVZ9 245 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 C4orf51C9J302 202 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 ETV2O00321 342 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 HEXBP07686 556 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 RAB1AP62820 205 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TLE4Q04727 773 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TRMT12Q53H54 448 aaKnown RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 GLYATL3Q5SZD4 288 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 TMEM244Q5VVB8 128 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 CYB5R2Q6BCY4 276 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OPN5Q6U736 354 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 KDF1Q8NAX2 398 aaPredicted RBP4.92□□□□□ -1.62
PTPRD-205ENST00000397611 RASD2Q96D21 266 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 NICN1Q9BSH3 213 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 MMP26Q9NRE1 261 aa4.92□□□□□ -1.62
PTPRD-205ENST00000397611 OR52A4PA6NMU1 304 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF724A8MTY0 619 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MPTX1A8MV57 137 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 CTSVO60911 334 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 UPK3AO75631 287 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 IL9P15248 144 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 RAB4AP20338 218 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 FKBP2P26885 142 aaKnown RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 AVPR2P30518 371 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SURF2Q15527 256 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 LTB4RQ15722 352 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MOGAT2Q3SYC2 334 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 KIRREL2Q6UWL6 708 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 COMMD1Q8N668 190 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 OR1E3Q8WZA6 343 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 PAPOLGQ9BWT3 736 aaKnown RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 H0YIG0 161 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 AP4M1O00189 453 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 GP1BAP07359 652 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF888P0CJ79 500 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 PI3P19957 117 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 NFYBP25208 207 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 HAAOP46952 286 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF84P51523 738 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 F2RL1P55085 397 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 GUCA2BQ16661 112 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF600Q6ZNG1 722 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MAMDC2Q7Z304 686 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ATG4DQ86TL0 474 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 OR56B1Q8NGI3 324 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 RAB33BQ9H082 229 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 WDR76Q9H967 626 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 BCO1Q9HAY6 547 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 OR5V1Q9UGF6 321 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 AK3Q9UIJ7 227 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 GDI1P31150 447 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 FCGR2CP31995 323 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 TLE3Q04726 772 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SLC22A6Q4U2R8 563 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 STAC2Q6ZMT1 411 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 LRP11Q86VZ4 500 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MISPQ8IVT2 679 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MRPL38Q96DV4 380 aaKnown RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 PRTFDC1Q9NRG1 225 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 PRSS38A1L453 326 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 P2RY10O00398 339 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SLC25A4P12235 298 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 CCNOP22674 350 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 VIPR2P41587 438 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 CX3CR1P49238 355 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ARRB1P49407 418 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 RBP2P50120 134 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ATP1B3P54709 279 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF74Q16587 644 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 PCK2Q16822 640 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 EXD3Q8N9H8 876 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SPIN2AQ99865 258 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SPIN2BQ9BPZ2 258 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MBNL1Q9NR56 388 aaKnown RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SDHAF3Q9NRP4 125 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 SERINC1Q9NRX5 453 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 UQCC1Q9NVA1 299 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 CTSFQ9UBX1 484 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 A0A1B0GTI1 187 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 A8MXE2 369 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 LRP3O75074 770 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 HOXD4P09016 255 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 TESK1Q15569 626 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 AWAT1Q58HT5 328 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 TFAP2EQ6VUC0 442 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MAMSTRQ6ZN01 415 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MOB3CQ70IA8 216 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 LYG2Q86SG7 212 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 CA13Q8N1Q1 262 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZDHHC22Q8N966 263 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 ZNF784Q8NCA9 323 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-205ENST00000397611 WBP1Q96G27 269 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 TM7SF3Q9NS93 570 aa4.91□□□□□ -1.62
PTPRD-205ENST00000397611 MYO9BQ13459 2157 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms