RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 TBCCD1Q9NVR7 557 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 NKIRAS2Q9NYR9 191 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 H2AFY2Q9P0M6 372 aaPredicted RBP12.46□□□□□ -0.42
SEC13-208ENST00000397109 ASH2LQ9UBL3 628 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 ATPIF1Q9UII2 106 aa12.46□□□□□ -0.42
SEC13-208ENST00000397109 JMJD1CQ15652 2540 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 IGLV1-36A0A0B4J1U3 117 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 RIIAD1A6NNX1 92 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 DCTN6O00399 190 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 ABHD16AO95870 558 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 NAT2P11245 290 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 ZNF3P17036 446 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 PSMB9P28065 219 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 LIPAP38571 399 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 MAP2K4P45985 399 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 ZNF91Q05481 1191 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 TIGD6Q17RP2 521 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 TIMM50Q3ZCQ8 353 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 SLC35F1Q5T1Q4 408 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 AADACL4Q5VUY2 407 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 ZBTB46Q86UZ6 589 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 GJC3Q8NFK1 279 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 OR52E2Q8NGJ4 325 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 SLC25A40Q8TBP6 338 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 RDH5Q92781 318 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 MND1Q9BWT6 205 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 NMNAT2Q9BZQ4 307 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 ISYNA1Q9NPH2 558 aa12.45□□□□□ -0.42
SEC13-208ENST00000397109 RPRD1BQ9NQG5 326 aaKnown RBP12.45□□□□□ -0.42
SEC13-208ENST00000397109 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 A8MV72 311 aaPredicted RBP12.44□□□□□ -0.42
SEC13-208ENST00000397109 GAAP10253 952 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 ACHEP22303 614 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 MTNR1AP48039 350 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 SLC25A1P53007 311 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 RIN1Q13671 783 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 CRMP1Q14194 572 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 CTF1Q16619 201 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 ALKBH6Q3KRA9 238 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 ELFN2Q5R3F8 820 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 GDPGP1Q6ZNW5 385 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 RFPL4BQ6ZWI9 263 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 NANOGP1Q8N7R0 232 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 SLC37A3Q8NCC5 494 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 SLC26A10Q8NG04 563 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 OR1F12Q8NHA8 337 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 KLF14Q8TD94 323 aaPredicted RBP12.44□□□□□ -0.42
SEC13-208ENST00000397109 DCLRE1CQ96SD1 692 aaKnown RBP12.44□□□□□ -0.42
SEC13-208ENST00000397109 JAM3Q9BX67 310 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 OR2J1Q9GZK6 312 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 CHODLQ9H9P2 273 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 CYSLTR2Q9NS75 346 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 CHCHD3Q9NX63 227 aaKnown RBP12.44□□□□□ -0.42
SEC13-208ENST00000397109 DNAJC27Q9NZQ0 273 aa12.44□□□□□ -0.42
SEC13-208ENST00000397109 CGGBP1Q9UFW8 167 aaPredicted RBP12.44□□□□□ -0.42
SEC13-208ENST00000397109 EXOSC1Q9Y3B2 195 aaKnown RBP12.44□□□□□ -0.42
SEC13-208ENST00000397109 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 PLSCR5A0PG75 271 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 OR6C6A6NF89 314 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 J3QW42 95 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 NGFP01138 241 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 HPXP02790 462 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 TACSTD2P09758 323 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 IGHV4-31P0DP07 118 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 CD36P16671 472 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 HTR1FP30939 366 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 RGS6P49758 472 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 TMEM33P57088 247 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 HIST1H3AP68431 136 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 CCDC92Q53HC0 331 aaPredicted RBP12.43□□□□□ -0.42
SEC13-208ENST00000397109 FAM209AQ5JX71 171 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 SPATA46Q5T0L3 261 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 HIST2H3PS2Q5TEC6 136 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 SLC16A12Q6ZSM3 486 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 HIST2H3AQ71DI3 136 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 CDADC1Q9BWV3 514 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 HDHD2Q9H0R4 259 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 KCNG2Q9UJ96 466 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 EXOGQ9Y2C4 368 aaKnown RBP12.43□□□□□ -0.42
SEC13-208ENST00000397109 GRIP1Q9Y3R0 1128 aa12.43□□□□□ -0.42
SEC13-208ENST00000397109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.42□□□□□ -0.429e-8■■□□□ 13.1
SEC13-208ENST00000397109 RER1O15258 196 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 CRLF1O75462 422 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 GPANK1O95872 356 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 HLA-DQA2P01906 255 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 MYL12AP19105 171 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 PAICSP22234 425 aaKnown RBP12.42□□□□□ -0.42
SEC13-208ENST00000397109 MPV17P39210 176 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 ZNF81P51508 661 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 MEP1BQ16820 701 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 ZMAT1Q5H9K5 638 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 ARMCX4Q5H9R4 360 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.42□□□□□ -0.42
SEC13-208ENST00000397109 OR2AJ1Q8NGZ0 328 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 OR2T4Q8NH00 348 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 PTP4A1Q93096 173 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 MGLLQ99685 303 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 COQ7Q99807 217 aa12.42□□□□□ -0.42
SEC13-208ENST00000397109 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms