RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TGIF2LXQ8IUE1 241 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 WDR31Q8NA23 367 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 LILRB1Q8NHL6 650 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 ADGRG7Q96K78 797 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CORINQ9Y5Q5 1042 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CHRM2P08172 466 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 PIPP12273 146 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 PRLHRP49683 370 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 IL20Q9NYY1 176 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF716A6NP11 495 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 Q6ZNX1 250 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 LRP11Q86VZ4 500 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 TXLNGYQ9BZA5 131 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 G3V3Y1 287 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 SIRPB1O00241 398 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 LIMS3P0CW19 117 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 LIMS4P0CW20 117 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CD68P34810 354 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CEBPDP49716 269 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 TMEM267Q0VDI3 215 aaPredicted RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 COL5A1-AS1Q5SY13 56 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 LYG2Q86SG7 212 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF480Q8WV37 535 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 EDEM2Q9BV94 578 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 MRPL37Q9BZE1 423 aaKnown RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CHST2Q9Y4C5 530 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 CRISP2P16562 243 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 BMP5P22003 454 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 EPHA2P29317 976 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 GJA4P35212 333 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 OR2A2Q6IF42 318 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 RTP4Q96DX8 246 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 MRPS24Q96EL2 167 aaKnown RBP9.43□□□□□ -0.9
COL4A4-201ENST00000396625 ACY3Q96HD9 319 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
COL4A4-201ENST00000396625 SEMA7AO75326 666 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 AOAHP28039 575 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 NOVA1P51513 510 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CDKN3Q16667 212 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 FAAP20Q6NZ36 180 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 IL22RA2Q969J5 263 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 Q9Y3F1 56 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 SOCS7O14512 581 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 SPINK4O60575 86 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RPS23P62266 143 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 SPRED1Q7Z699 444 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RTN4IP1Q8WWV3 396 aaPredicted RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 DTD2Q96FN9 168 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RNF2Q99496 336 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RCL1Q9Y2P8 373 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CYBAP13498 195 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF141Q15928 474 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF385BQ569K4 471 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 PPP1R1CQ8WVI7 109 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 OR2A14Q96R47 310 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 TWSG1Q9GZX9 223 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 TXNIPQ9H3M7 391 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 C5P01031 1676 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 IGKV6D-41A0A0C4DH26 115 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 H0YGG7 62 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CLEC2LP0C7M8 214 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CD40P25942 277 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 MEOX2P50222 304 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 PITX1P78337 314 aaPredicted RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 ZNF789Q5FWF6 425 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 GABRG1Q8N1C3 465 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 C17orf78Q8N4C9 275 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RHBDD1Q8TEB9 315 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 AKR7A2O43488 359 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 MT-ATP6P00846 226 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CD14P08571 375 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CD99P14209 185 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RGRP47804 291 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 MAT1AQ00266 395 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 PMP22Q01453 160 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 ZC3H3Q8IXZ2 948 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 PLPP6Q8IY26 295 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 TTC9Q92623 222 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 PHF3Q92576 2039 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 MEIKINA0A087WXM9 373 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 FITM1A5D6W6 292 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 M0R3E3 92 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 XRCC2O43543 280 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 CBR3O75828 277 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RAB38P57729 211 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 LPAL2Q16609 132 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 SMIM21Q3B7S5 101 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 PVRP15151 417 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 ARRB2P32121 409 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 TRMT12Q53H54 448 aaKnown RBP9.42□□□□□ -0.9
COL4A4-201ENST00000396625 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 RAB37Q96AX2 223 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 NPAS1Q99742 590 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 TJP1Q07157 1748 aa9.42□□□□□ -0.9
COL4A4-201ENST00000396625 FBLL1A6NHQ2 334 aaKnown RBP9.41□□□□□ -0.9
COL4A4-201ENST00000396625 SCRG1O75711 98 aa9.41□□□□□ -0.9
COL4A4-201ENST00000396625 LIPAP38571 399 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms