RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ZNF441Q8N8Z8 693 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 OR1M1Q8NGA1 313 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 ELP5Q8TE02 316 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 RAB40AQ8WXH6 277 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 POTEKPQ9BYX7 375 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 PARPBPQ9NWS1 579 aa14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 ZNF230Q9UIE0 474 aaPredicted RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 MCTS1Q9ULC4 181 aaKnown RBP14.09□□□□□ -0.15
SMARCD1-202ENST00000394963 TMEM131Q92545 1883 aa14.08□□□□□ -0.15
SMARCD1-202ENST00000394963 A0A0G2JK05 382 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 POM121CA8CG34 1229 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 C9orf172C9J069 976 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 RAB14P61106 215 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 MOB3CQ70IA8 216 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 RHOUQ7L0Q8 258 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 GALNT11Q8NCW6 608 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 OR8B12Q8NGG6 310 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF519Q8TB69 540 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 COMMD9Q9P000 198 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 IGLV3-12A0A075B6K2 115 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 GGT3PA6NGU5 568 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 NR2C1P13056 603 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 AMY2BP19961 511 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 THBS2P35442 1172 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 NOVA1P51513 510 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 SUMO3P55854 103 aaPredicted RBP14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 TAF9Q16594 264 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 OLFML2AQ68BL7 652 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 STEAP1BQ6NZ63 245 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 BPHLQ86WA6 291 aaPredicted RBP14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 SORCS2Q96PQ0 1159 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 PAPOLGQ9BWT3 736 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 TMEM59Q9BXS4 323 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 SRXN1Q9BYN0 137 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 ACKR4Q9NPB9 350 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 FBXO4Q9UKT5 387 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 TMEM272A0A1B0GTI8 110 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 MEGF11A6BM72 1044 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 UBCP0CG48 685 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF32P17041 273 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 OR3A4PP47883 348 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 MLF1P58340 268 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 MOGAT2Q3SYC2 334 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 DCAF10Q5QP82 559 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 BOLLQ8N9W6 283 aaKnown RBP14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 OR4C16Q8NGL9 310 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 SLC25A38Q96DW6 304 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 BORCS8Q96FH0 119 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 KCNK17Q96T54 332 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 ZFP64Q9NPA5 681 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 FOXJ3Q9UPW0 622 aa14.08□□□□□ -0.16
SMARCD1-202ENST00000394963 NCOA6Q14686 2063 aaPredicted RBP14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 FTCDNL1E5RQL4 147 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF254O75437 659 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 HPXP02790 462 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 OPRM1P35372 400 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 SCRN3Q0VDG4 424 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 GGTLC2Q14390 218 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 PLEKHJ1Q9NW61 149 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 SCP2D1Q9UJQ7 156 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 ECDO95905 644 aaPredicted RBP14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 SERPINA7P05543 415 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 HTR2BP41595 481 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 CSNK2A3Q8NEV1 391 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 SMIM4Q8WVI0 70 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 ZBTB8AQ96BR9 441 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 WDR54Q9H977 334 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 NUBP2Q9Y5Y2 271 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 FRYQ5TBA9 3013 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 CACNA1AO00555 2505 aa14.07□□□□□ -0.16
SMARCD1-202ENST00000394963 ANKRD33BA6NCL7 494 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 GABARAPH6UMI1 98 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 TRAF3IP2O43734 574 aaPredicted RBP14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 PEX14O75381 377 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 OR7C1O76099 320 aaPredicted RBP14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 CD46P15529 392 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 DDOSTP39656 456 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 PLP2Q04941 152 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ZMYND11Q15326 602 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 CCDC92Q53HC0 331 aaPredicted RBP14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 TUSC5Q8IXB3 177 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 OR1J2Q8NGS2 313 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 HAVCR1Q96D42 359 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 HIST1H2AAQ96QV6 131 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 NICN1Q9BSH3 213 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 HEATR1Q9H583 2144 aaKnown RBP14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 C5orf49A4QMS7 147 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 PYCARD-AS1I3L0S3 204 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ADAM10O14672 748 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 SLC22A5O76082 557 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 SERPINA5P05154 406 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 LCN1P31025 176 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ARPC4P59998 168 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 PLCXD3Q63HM9 321 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 IMMP1LQ96LU5 166 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 DDOQ99489 341 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 ZNF442Q9H7R0 627 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 NIPAL2Q9H841 368 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 LOC400499M0QZD8 3231 aa14.06□□□□□ -0.16
SMARCD1-202ENST00000394963 NPIPB7O75200 414 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms