RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 TP53I13Q8NBR0 393 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SOX7Q9BT81 388 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 BARX1Q9HBU1 254 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 MED9Q9NWA0 146 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 CSAG2Q9Y5P2 127 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 PAPPA2Q9BXP8 1791 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 HMX2A2RU54 273 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SDCBPO00560 298 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 GPM6AP51674 278 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SLC25A26Q70HW3 274 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 RHOUQ7L0Q8 258 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 MOB3BQ86TA1 216 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 OR10AD1Q8NGE0 317 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SLC22A13Q9Y226 551 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 NCBP2LA6PVI3 153 aaKnown RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 NDUFB3O43676 98 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 KLK8O60259 260 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 OR10A3P58181 314 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 OR13C5Q8NGS8 318 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 TMEM230Q96A57 120 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 PARP12Q9H0J9 701 aaKnown RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 GABARAPL1Q9H0R8 117 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SERTM2A0A1B0GWG4 89 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 AGERQ15109 404 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 TAF9Q16594 264 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 OR2Z1Q8NG97 314 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 OR10G3Q8NGC4 313 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 BCL2L10Q9HD36 194 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 P4HTMQ9NXG6 502 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 KRBOX1C9JBD0 128 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 MBTPS2O43462 519 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 POU2F2P09086 479 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 IAPPP10997 89 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SOX18P35713 384 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 P2RX3P56373 397 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 TRIP6Q15654 476 aaKnown RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 ANKRD34AQ69YU3 496 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 KCNRGQ8N5I3 272 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 OR10R2Q8NGX6 335 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 RPP25Q9BUL9 199 aaKnown RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF331Q9NQX6 463 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-203ENST00000394872 NDUFB11Q9NX14 153 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 SLCO1C1Q9NYB5 712 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 RNF150Q9ULK6 438 aa9.39□□□□□ -0.91
COL4A6-203ENST00000394872 ECM29Q5VYK3 1845 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 TRGV10A0A0A0MS01 117 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF83P51522 516 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 PAQR6Q6TCH4 344 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 SIGLEC11Q96RL6 698 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 GABARAPL3Q9BY60 117 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 TMEM235A6NFC5 223 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 ZAR1LA6NP61 321 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 LINC01387J3KSC0 135 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 SULT1C4O75897 302 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 CBR1P16152 277 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 TAS2R45P59539 299 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 CD276Q5ZPR3 534 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 KIRREL2Q6UWL6 708 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 APH1BQ8WW43 257 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 FOXB1Q99853 325 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 ING1Q9UK53 422 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-203ENST00000394872 GAB2Q9UQC2 676 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 HSPB2A8KAH6 182 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 PPM1DO15297 605 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 XRCC3O43542 346 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 JUNBP17275 347 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-203ENST00000394872 ABCD3P28288 659 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 HSPB2Q16082 182 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 GSG1Q2KHT4 349 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 LYSMD2Q8IV50 215 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 OSR2Q8N2R0 312 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 ANKRD53Q8N9V6 530 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 ST3GAL6Q9Y274 331 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 SPRY1O43609 319 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-203ENST00000394872 HNF1AP20823 631 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 TGM1P22735 817 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 FCGR2CP31995 323 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 OR10P1Q8NGE3 313 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 SLC7A6Q92536 515 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 CNRIP1Q96F85 164 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-203ENST00000394872 FZR1Q9UM11 496 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 TMEM268Q5VZI3 342 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 CXorf67Q86X51 503 aaPredicted RBP9.38□□□□□ -0.91
COL4A6-203ENST00000394872 LFNGQ8NES3 379 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 OR5H6Q8NGV6 325 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 OR1L3Q8NH93 324 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 SMOC1Q9H4F8 434 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 RNF167Q9H6Y7 350 aa9.38□□□□□ -0.91
COL4A6-203ENST00000394872 DOCK2Q92608 1830 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 FZD6O60353 706 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 TNFRSF1AP19438 455 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 BPIFB3P59826 476 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 C17orf78Q8N4C9 275 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 MARC2Q969Z3 335 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 APOBEC3DQ96AK3 386 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-203ENST00000394872 ADAT1Q9BUB4 502 aaKnown RBP9.37□□□□□ -0.91
COL4A6-203ENST00000394872 LAMA4Q16363 1823 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms